Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3509

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3508: 11876 - K00273 DAO, aao D-amino-acid oxidase, at 262160 to 263731 11876 mRNA_3509: 11877 - K01464 DPYS, dht, hydA dihydropyrimidinase, at 263913 to 265913 11877 mRNA_3510: 11878 - K00889 PIP5K 1-phosphatidylinositol-4-phosphate 5-kinase, at 266286 to 268239 11878

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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263,057 - 11876 mRNA_3508 0.57 0.3
263,204 - 11876 mRNA_3508 0.66 0.3
263,539 + 11876 mRNA_3508 0.88 0.1
263,561 + 11876 mRNA_3508 0.89 -1.3
263,674 + 1.3
263,703 + -0.7
263,885 - -0.1
263,944 - -0.8
263,975 - 0.1
264,072 - 1.0
264,328 + 11877 mRNA_3509 0.21 -0.5
264,688 + 11877 mRNA_3509 0.39 -2.4
264,753 - 11877 mRNA_3509 0.42 0.4
264,858 + 11877 mRNA_3509 0.47 -0.3
264,871 + 11877 mRNA_3509 0.48 1.4
264,986 + 11877 mRNA_3509 0.54 0.5
265,295 + 11877 mRNA_3509 0.69 -0.2
265,759 - 0.8
265,765 + -0.5
266,058 + -0.8
266,126 - -1.9
266,231 - 0.4