Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3459

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3458: 11826 - K03857 PIGA, GPI3 phosphatidylinositol glycan, class A, at 145752 to 147635 11826 mRNA_3459: 11827 - ProSiteProfiles-Src homology 3 (SH3) domain profile.-PS50002,SMART-Src homology 3 domains-SM00326,SUPERFAMILY--SSF50044, at 147794 to 151467 11827 mRNA_3460: 11828 - HMMPfam-Fasciclin domain-PF02469,SUPERFAMILY--SSF82153, at 151624 to 153827 11828

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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147,702 + -0.2
148,004 - -0.5
148,011 + -0.1
148,011 + -0.0
148,011 + -2.5
148,129 - 0.9
148,418 - 11827 mRNA_3459 0.17 -0.3
148,468 - 11827 mRNA_3459 0.18 -0.8
148,544 - 11827 mRNA_3459 0.20 -0.0
148,610 - 11827 mRNA_3459 0.22 -0.5
148,627 - 11827 mRNA_3459 0.23 -0.6
148,648 - 11827 mRNA_3459 0.23 -0.3
148,742 + 11827 mRNA_3459 0.26 -0.8
148,907 - 11827 mRNA_3459 0.30 0.3
148,912 - 11827 mRNA_3459 0.30 -0.5
149,020 + 11827 mRNA_3459 0.33 0.5
149,096 - 11827 mRNA_3459 0.35 -0.9
149,147 - 11827 mRNA_3459 0.37 -1.0
149,188 + 11827 mRNA_3459 0.38 0.2
149,478 - 11827 mRNA_3459 0.46 -0.2
149,638 + 11827 mRNA_3459 0.50 -0.5
149,650 + 11827 mRNA_3459 0.51 1.1
149,654 + 11827 mRNA_3459 0.51 2.2
149,778 + 11827 mRNA_3459 0.54 -0.7
149,881 - 11827 mRNA_3459 0.57 -1.1
149,908 - 11827 mRNA_3459 0.58 -0.2
149,915 + 11827 mRNA_3459 0.58 0.5
149,979 + 11827 mRNA_3459 0.59 0.4
149,981 - 11827 mRNA_3459 0.60 -0.3
150,056 - 11827 mRNA_3459 0.62 -0.3
150,070 + 11827 mRNA_3459 0.62 -1.1
150,071 - 11827 mRNA_3459 0.62 1.0
150,090 - 11827 mRNA_3459 0.62 1.0
150,090 - 11827 mRNA_3459 0.62 0.5
150,215 - 11827 mRNA_3459 0.66 -1.5
150,217 + 11827 mRNA_3459 0.66 0.4
150,221 - 11827 mRNA_3459 0.66 0.3
150,294 + 11827 mRNA_3459 0.68 2.3
150,370 - 11827 mRNA_3459 0.70 0.0
150,476 - 11827 mRNA_3459 0.73 -0.9
150,535 - 11827 mRNA_3459 0.75 0.9
150,641 - 11827 mRNA_3459 0.77 0.4
150,671 - 11827 mRNA_3459 0.78 0.9
150,794 - 11827 mRNA_3459 0.82 -1.3
150,834 - 11827 mRNA_3459 0.83 0.9
150,913 - 11827 mRNA_3459 0.85 0.4
150,916 + 11827 mRNA_3459 0.85 -0.1
150,943 + 11827 mRNA_3459 0.86 2.2
151,047 + 11827 mRNA_3459 0.89 -0.7
151,093 - 11827 mRNA_3459 0.90 0.5
151,172 + -0.5
151,281 - -1.6
151,391 - 0.6
151,395 - -0.4
151,397 - 0.4
151,403 - -0.2
151,411 - -1.7
151,434 + -1.5
151,520 + 0.1
151,525 + -0.9
151,529 + -0.1
151,559 + -0.3
151,564 + 0.1
151,568 + 0.0
151,570 + 0.9
151,574 + 0.1
151,710 + -0.9
151,714 - -0.1
151,866 + 11828 mRNA_3460 0.11 1.5
152,018 - 11828 mRNA_3460 0.18 1.5
152,362 - 11828 mRNA_3460 0.33 0.5