Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3229

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3228: 11596 - Hypothetical Protein, at 150554 to 152280 11596 mRNA_3229: 11597 - K01113 phoD alkaline phosphatase D, at 152510 to 154539 11597 mRNA_3230: 11598 - HMMPfam-Region of unknown function (DUF2417)-PF10329, at 155480 to 157759 11598

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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151,523 + 11596 mRNA_3228 0.56 -0.0
151,598 + 11596 mRNA_3228 0.60 -0.4
151,667 + 11596 mRNA_3228 0.64 0.9
151,694 - 11596 mRNA_3228 0.66 -1.0
151,708 - 11596 mRNA_3228 0.67 -0.7
151,708 - 11596 mRNA_3228 0.67 1.0
151,708 - 11596 mRNA_3228 0.67 -0.7
151,708 + 11596 mRNA_3228 0.67 -1.3
151,709 + 11596 mRNA_3228 0.67 0.2
151,709 - 11596 mRNA_3228 0.67 1.1
151,709 - 11596 mRNA_3228 0.67 -0.2
151,713 + 11596 mRNA_3228 0.67 2.2
151,765 + 11596 mRNA_3228 0.70 0.8
151,849 + 11596 mRNA_3228 0.75 0.1
152,208 + 2.0
152,295 - -0.1
152,299 - 3.0
152,321 - 1.8
152,344 + 1.1
152,557 + 0.9
152,591 + -0.3
152,600 + 0.3
152,679 - 0.8
152,720 - 11597 mRNA_3229 0.10 -0.2
152,993 - 11597 mRNA_3229 0.24 -0.5
153,047 - 11597 mRNA_3229 0.26 -0.0
153,166 - 11597 mRNA_3229 0.32 -0.4
153,179 + 11597 mRNA_3229 0.33 0.2
153,385 + 11597 mRNA_3229 0.43 -0.1
153,593 + 11597 mRNA_3229 0.53 -0.6
153,881 - 11597 mRNA_3229 0.68 -0.0
153,912 + 11597 mRNA_3229 0.69 1.3
154,487 - -0.8
154,897 - 0.1
154,921 - 0.2
154,927 - -0.4
155,030 - 0.7
155,044 - 1.5
155,076 + 0.1
155,192 - -0.1
155,211 + -0.8
155,214 + 0.1
155,336 - 0.5
155,344 - 0.7
155,348 - -0.5
155,350 - -0.0
155,350 + 1.7
155,352 - -0.1
155,356 + 0.2
155,363 - 0.7
155,368 - 2.2
155,370 - -0.5
155,371 - -0.0
155,373 + -1.3
155,375 - -0.8
155,376 + 0.6
155,378 + 2.0
155,378 + -0.1
155,383 + 1.9
155,419 - 0.6