Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3191

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3190: 11558 - KOG2427 Uncharacterized conserved protein, at 47974 to 50099 11558 mRNA_3191: 11559 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 50210 to 52668 11559 mRNA_3192: 11560 - HMMPfam-Hypothetical protein FLILHELTA-PF10306, at 53069 to 53726 11560

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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49,405 - 11558 mRNA_3190 0.67 -0.4
49,406 + 11558 mRNA_3190 0.67 -1.7
49,526 - 11558 mRNA_3190 0.73 0.5
49,655 - 11558 mRNA_3190 0.79 0.8
49,684 - 11558 mRNA_3190 0.80 0.3
50,015 + 0.8
50,022 + 0.9
50,113 + 0.7
50,280 - 1.5
50,327 + -0.2
50,337 + 0.2
50,491 + 11559 mRNA_3191 0.11 0.0
50,505 + 11559 mRNA_3191 0.12 0.6
50,598 + 11559 mRNA_3191 0.16 0.9
50,645 - 11559 mRNA_3191 0.18 0.8
50,826 - 11559 mRNA_3191 0.25 2.0
50,918 - 11559 mRNA_3191 0.29 -0.4
51,048 - 11559 mRNA_3191 0.34 1.1
51,138 + 11559 mRNA_3191 0.38 -2.0
51,175 - 11559 mRNA_3191 0.39 -0.1
51,191 + 11559 mRNA_3191 0.40 0.6
51,230 + 11559 mRNA_3191 0.41 0.6
51,679 + 11559 mRNA_3191 0.60 0.4
51,894 + 11559 mRNA_3191 0.68 -0.2
51,943 + 11559 mRNA_3191 0.70 0.4
51,960 + 11559 mRNA_3191 0.71 0.5
51,967 - 11559 mRNA_3191 0.71 0.8
52,054 - 11559 mRNA_3191 0.75 0.2
52,183 - 11559 mRNA_3191 0.80 -0.5
52,183 + 11559 mRNA_3191 0.80 0.2
52,315 - 11559 mRNA_3191 0.86 0.4
52,566 + -0.4
52,631 + 0.4
52,894 + 0.8
52,922 - 0.1
53,157 + 11560 mRNA_3192 0.13 -0.0
53,366 + 11560 mRNA_3192 0.45 0.4
53,508 + 11560 mRNA_3192 0.67 -0.2
53,523 + 11560 mRNA_3192 0.69 0.2
53,635 - 11560 mRNA_3192 0.86 0.8