Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2980

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2980: 11348 - KOG3140 Predicted membrane protein, at 23 to 1444 11348

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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1 + 1.2
1 + -0.2
1 + -1.2
21 + 1.2
21 + 0.3
21 + -1.0
41 + 0.7
42 + 0.1
44 + 3.5
79 - 0.7
79 + 1.3
149 - 3.1
264 + 11348 mRNA_2980 0.17 1.3
266 - 11348 mRNA_2980 0.17 0.8
338 - 11348 mRNA_2980 0.22 0.3
341 + 11348 mRNA_2980 0.22 0.5
454 - 11348 mRNA_2980 0.30 2.9
484 - 11348 mRNA_2980 0.32 1.0
489 - 11348 mRNA_2980 0.33 1.5
491 + 11348 mRNA_2980 0.33 1.5
507 + 11348 mRNA_2980 0.34 2.3
510 + 11348 mRNA_2980 0.34 0.9
516 - 11348 mRNA_2980 0.35 0.0
654 + 11348 mRNA_2980 0.44 0.5
719 + 11348 mRNA_2980 0.49 1.1
1,007 + 11348 mRNA_2980 0.69 0.2
1,048 - 11348 mRNA_2980 0.72 1.2
1,218 - 11348 mRNA_2980 0.84 -0.0
1,248 + 11348 mRNA_2980 0.86 2.1
1,364 + 1.4
1,374 - -1.5
1,401 + 2.5
1,452 + -0.0
1,488 - 0.9
1,503 + 0.2
1,513 + 2.1
1,515 - 1.0
1,551 + -1.1
1,634 + 0.5
1,635 + 0.5
1,657 + 0.8
1,668 + 0.1
1,805 - 1.6
1,805 + 1.1
1,818 + 0.1
1,882 + 0.1
1,934 + -0.7
1,948 + 0.1
1,949 - 0.9
1,974 + -0.2
1,992 + -0.1
1,992 + 1.5
1,993 + 1.5
2,011 + 0.7
2,082 + 0.2
2,084 - 0.1
2,086 + -1.6
2,086 + -0.2
2,086 + -0.5
2,095 + 0.3
2,097 - 1.4
2,098 + 0.6
2,115 + 0.6
2,117 + 1.4
2,120 + 0.2
2,121 - 0.2
2,121 - -0.1
2,125 - 0.1
2,126 + 0.9
2,131 + -0.4
2,131 + -0.5
2,131 + 2.0
2,133 + 0.0
2,243 + 0.7
2,265 + 1.5
2,301 + 0.1
2,320 + 1.3
2,324 - -0.5
2,357 + -1.2