Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2949

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2948: 11316 - K12817 PRPF18, PRP18 pre-mRNA-splicing factor 18, at 625370 to 627125 11316 mRNA_2949: 11317 - K02267 COX6B cytochrome c oxidase subunit 6b, at 627743 to 628552 11317

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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627,196 - -0.1
627,208 - 1.0
627,213 - -0.2
627,215 + 2.6
627,217 + 1.4
627,218 + -0.5
627,224 + 0.7
627,341 - -1.1
627,347 - -0.9
627,353 - -0.1
627,354 + -0.2
627,361 + 0.2
627,374 + -0.2
627,379 + 0.0
627,517 + 1.7
627,533 + 0.7
627,643 - 2.9
627,644 - -0.2
627,670 + 0.4
627,949 + 11317 mRNA_2949 0.25 -0.6
627,949 - 11317 mRNA_2949 0.25 -0.7
627,953 - 11317 mRNA_2949 0.26 -0.6
628,022 + 11317 mRNA_2949 0.34 0.3
628,379 - 11317 mRNA_2949 0.79 -0.3
628,381 + 11317 mRNA_2949 0.79 0.3
628,562 - -0.6
628,662 + -1.2
628,696 - 0.2
628,834 - -1.6
628,842 + 0.9