Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2886

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2885: 11253 - K20246 EGT1 L-histidine Nalpha-methyltransferase / hercynylcysteine S-oxide synthase, at 452122 to 455835 11253 mRNA_2886: 11254 - Hypothetical Protein, at 456184 to 458722 11254 mRNA_2887: 11255 - K07442 TRM61, GCD14 tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit, at 458953 to 460669 11255

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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455,619 + 1.4
455,622 + 0.1
455,749 - 1.4
455,749 - 0.3
455,766 + 2.1
455,883 - 0.5
455,891 - -2.0
455,900 + 0.2
455,905 - 0.4
455,906 + 0.0
455,911 + -0.8
455,924 + 0.3
455,935 + -0.7
455,943 - 0.5
455,945 - 0.3
455,946 + -0.7
456,078 - 0.4
456,096 - 1.1
456,118 - 1.6
456,118 - -0.2
456,150 + 0.3
456,191 - -0.3
456,267 + 0.7
456,287 - -0.9
456,626 - 11254 mRNA_2886 0.17 0.2
457,154 + 11254 mRNA_2886 0.38 -0.7
457,466 + 11254 mRNA_2886 0.50 0.6
457,593 + 11254 mRNA_2886 0.55 0.7
457,646 - 11254 mRNA_2886 0.58 0.3
457,973 + 11254 mRNA_2886 0.70 1.2
458,260 + 11254 mRNA_2886 0.82 0.3
458,423 + 11254 mRNA_2886 0.88 1.8
458,528 - 0.1
458,563 + 0.9
458,698 + 0.0
458,729 - 0.9
458,845 + -0.2
458,851 + 0.8
458,859 + 0.1
458,868 + 0.3
458,902 + 0.8
458,944 + 0.1
458,950 - 0.4