Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2840

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2839: 11207 - K01427 URE urease, at 333745 to 337824 11207 mRNA_2840: 11208 - KOG4178 Soluble epoxide hydrolase, at 338126 to 339492 11208 mRNA_2841: 11209 - KOG3290 Peroxisomal phytanoyl-CoA hydroxylase, at 339851 to 340983 11209

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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337,360 + 11207 mRNA_2839 0.89 -0.8
337,391 - 11207 mRNA_2839 0.89 -1.0
337,449 + -0.6
337,557 - 2.7
337,571 - -0.1
337,571 - -0.8
337,577 + 0.3
337,596 + 0.5
337,779 - 0.9
337,779 - -0.4
337,860 + -0.9
337,883 + 1.5
337,897 - -0.0
338,013 - 3.6
338,188 + 0.5
338,204 + -0.3
338,214 + 1.2
338,862 + 11208 mRNA_2840 0.54 0.1
338,928 - 11208 mRNA_2840 0.59 -2.0
339,177 - 11208 mRNA_2840 0.77 -1.0
339,197 - 11208 mRNA_2840 0.78 1.3
339,313 + 11208 mRNA_2840 0.87 0.7
339,494 + 0.0
339,515 + 0.6
339,621 + 0.4
339,632 - 0.9
339,643 + 0.9
339,646 + 0.7
339,748 - -1.4
339,801 - -0.8
339,807 - -1.4
339,890 - -0.1
339,928 - -0.0
339,948 + -0.2
339,951 - 0.8
339,961 - -0.7
340,069 - 11209 mRNA_2841 0.19 0.1
340,086 - 11209 mRNA_2841 0.21 1.1
340,101 - 11209 mRNA_2841 0.22 4.2
340,240 + 11209 mRNA_2841 0.34 0.2
340,396 - 11209 mRNA_2841 0.48 1.2
340,398 - 11209 mRNA_2841 0.48 -0.5