Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2803

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2802: 11170 - K11309 RTT109, KAT11 regulator of Ty1 transposition protein 109, at 251577 to 253280 11170 mRNA_2803: 11171 - K01301 NAALAD N-acetylated-alpha-linked acidic dipeptidase, at 253457 to 256700 11171 mRNA_2804: 11172 - K10808 RRM2 ribonucleoside-diphosphate reductase subunit M2, at 257436 to 258912 11172

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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252,537 - 11170 mRNA_2802 0.56 0.4
253,355 + 1.2
253,415 + 2.2
253,416 - 0.6
253,506 + 1.3
253,527 - -1.3
253,670 - -1.2
253,680 - 0.1
253,687 + 2.2
253,690 + -0.8
253,698 + -0.5
253,701 + 0.4
254,007 + 11171 mRNA_2803 0.17 -0.5
254,133 - 11171 mRNA_2803 0.21 0.8
254,165 + 11171 mRNA_2803 0.22 1.4
254,277 - 11171 mRNA_2803 0.25 -0.1
254,635 + 11171 mRNA_2803 0.36 -0.8
254,711 - 11171 mRNA_2803 0.39 -0.5
254,723 - 11171 mRNA_2803 0.39 0.6
254,727 + 11171 mRNA_2803 0.39 -1.1
254,969 + 11171 mRNA_2803 0.47 0.2
255,132 - 11171 mRNA_2803 0.52 0.9
255,943 - 11171 mRNA_2803 0.77 0.8
256,009 - 11171 mRNA_2803 0.79 0.8
256,027 + 11171 mRNA_2803 0.79 -0.6
256,046 + 11171 mRNA_2803 0.80 0.9
256,199 + 11171 mRNA_2803 0.85 -0.9
256,596 - -0.6
256,602 - -0.1
256,603 - 0.6
256,615 - 0.4
256,784 + 1.3
256,797 + 2.3
256,890 - 0.3
256,909 + -0.5
256,923 + -0.5
256,927 + -0.9
256,935 + -1.4
256,940 + -1.8
257,059 + 1.1
257,070 - 0.7
257,073 + 0.7
257,079 + 1.3
257,090 - 0.3
257,202 - 2.0
257,211 + -1.5
257,214 - 0.2
257,219 + 0.9
257,237 + 0.9
257,240 - 0.1
257,368 + -0.9