Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2768

Experiments: YNB Glucose 75mM Methionine

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2767: 11135 - K10084 EDEM1 ER degradation enhancer, mannosidase alpha-like 1, at 166551 to 170333 11135 mRNA_2768: 11136 - K08681 pdxT, pdx2 5'-phosphate synthase pdxT subunit, at 170479 to 171341 11136 mRNA_2769: 11137 - K06215 pdxS, pdx1 pyridoxal 5'-phosphate synthase pdxS subunit, at 171565 to 173167 11137

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
remove
169,766 - 11135 mRNA_2767 0.85 0.0
169,779 + 11135 mRNA_2767 0.85 0.5
169,810 - 11135 mRNA_2767 0.86 1.2
170,517 - 0.4
170,669 - 11136 mRNA_2768 0.22 -1.1
170,811 - 11136 mRNA_2768 0.38 0.2
170,952 + 11136 mRNA_2768 0.55 0.3
170,988 + 11136 mRNA_2768 0.59 -0.5
171,119 - 11136 mRNA_2768 0.74 -0.0
171,267 - -0.0
171,300 + -0.8
171,440 - -0.2
171,444 - -0.5
171,478 + 1.1
171,644 + -0.8
171,646 + 0.3
171,647 - -0.3
171,669 - -1.2
171,778 + 11137 mRNA_2769 0.13 -0.1
171,787 - 11137 mRNA_2769 0.14 -0.5
171,920 - 11137 mRNA_2769 0.22 0.3
171,928 + 11137 mRNA_2769 0.23 0.0
172,075 + 11137 mRNA_2769 0.32 0.6
172,216 + 11137 mRNA_2769 0.41 -0.6
172,216 - 11137 mRNA_2769 0.41 -0.3
172,217 + 11137 mRNA_2769 0.41 -0.9