Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2690

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2690: 11058 - ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257, at 13747 to 14595 11058 mRNA_2691: 11059 - Hypothetical Protein, at 15560 to 16423 11059

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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12,895 + -1.3
13,053 - 1.0
13,057 - 0.1
13,068 + 0.4
13,229 + 0.9
13,313 + -0.7
13,470 - -0.6
13,480 - 0.5
13,480 - 1.9
13,497 - 0.6
13,499 - 0.5
13,503 - 0.4
13,509 - -0.2
13,510 + 0.2
13,517 + 0.1
13,522 + 0.5
13,522 + 0.9
13,661 - 0.6
13,810 - -0.8
13,834 + 11058 mRNA_2690 0.10 -1.0
13,943 - 11058 mRNA_2690 0.23 -1.0
13,949 + 11058 mRNA_2690 0.24 0.1
13,952 + 11058 mRNA_2690 0.24 0.3
13,958 + 11058 mRNA_2690 0.25 2.7
13,960 - 11058 mRNA_2690 0.25 -1.3
13,963 + 11058 mRNA_2690 0.25 -1.0
13,967 + 11058 mRNA_2690 0.26 1.3
13,971 - 11058 mRNA_2690 0.26 0.1
13,984 - 11058 mRNA_2690 0.28 1.0
13,994 + 11058 mRNA_2690 0.29 2.0
14,085 - 11058 mRNA_2690 0.40 1.1
14,089 + 11058 mRNA_2690 0.40 -0.2
14,095 - 11058 mRNA_2690 0.41 -0.2
14,111 - 11058 mRNA_2690 0.43 0.0
14,133 + 11058 mRNA_2690 0.45 -2.4
14,168 + 11058 mRNA_2690 0.50 -0.3
14,168 + 11058 mRNA_2690 0.50 -0.3
14,168 - 11058 mRNA_2690 0.50 0.3
14,246 - 11058 mRNA_2690 0.59 -0.8
14,250 + 11058 mRNA_2690 0.59 0.6
14,267 + 11058 mRNA_2690 0.61 -1.0
14,268 - 11058 mRNA_2690 0.61 -1.7
14,283 - 11058 mRNA_2690 0.63 1.5
14,283 + 11058 mRNA_2690 0.63 -0.9
14,283 + 11058 mRNA_2690 0.63 0.5
14,285 - 11058 mRNA_2690 0.63 -0.1
14,287 - 11058 mRNA_2690 0.64 -1.4
14,291 + 11058 mRNA_2690 0.64 1.1
14,318 - 11058 mRNA_2690 0.67 -0.9
14,323 - 11058 mRNA_2690 0.68 0.9
14,329 - 11058 mRNA_2690 0.69 0.3
14,331 - 11058 mRNA_2690 0.69 0.1
14,338 - 11058 mRNA_2690 0.70 -0.3
14,342 - 11058 mRNA_2690 0.70 1.9
14,346 - 11058 mRNA_2690 0.71 0.9
14,353 + 11058 mRNA_2690 0.71 0.5
14,355 - 11058 mRNA_2690 0.72 -1.5
14,356 - 11058 mRNA_2690 0.72 -0.3
14,357 + 11058 mRNA_2690 0.72 0.4
14,360 - 11058 mRNA_2690 0.72 0.2
14,361 - 11058 mRNA_2690 0.72 0.8
14,366 + 11058 mRNA_2690 0.73 0.2
14,368 - 11058 mRNA_2690 0.73 0.2
14,368 + 11058 mRNA_2690 0.73 -0.2
14,374 - 11058 mRNA_2690 0.74 -0.8
14,376 - 11058 mRNA_2690 0.74 0.4
14,380 + 11058 mRNA_2690 0.75 0.5
14,382 - 11058 mRNA_2690 0.75 -1.7
14,398 - 11058 mRNA_2690 0.77 0.3
14,401 - 11058 mRNA_2690 0.77 0.2
14,401 - 11058 mRNA_2690 0.77 0.2
14,403 - 11058 mRNA_2690 0.77 0.5
14,408 - 11058 mRNA_2690 0.78 1.2
14,409 - 11058 mRNA_2690 0.78 1.1
14,411 + 11058 mRNA_2690 0.78 0.3
14,411 - 11058 mRNA_2690 0.78 0.6
14,413 + 11058 mRNA_2690 0.78 0.6
14,416 - 11058 mRNA_2690 0.79 0.8
14,416 + 11058 mRNA_2690 0.79 -0.2
14,421 + 11058 mRNA_2690 0.79 0.6
14,425 - 11058 mRNA_2690 0.80 0.5
14,427 + 11058 mRNA_2690 0.80 -0.9
14,428 + 11058 mRNA_2690 0.80 -0.6
14,430 + 11058 mRNA_2690 0.80 0.3
14,440 - 11058 mRNA_2690 0.82 -0.2
14,456 - 11058 mRNA_2690 0.84 0.2
14,466 + 11058 mRNA_2690 0.85 -0.8
14,539 - 0.5
14,545 - 1.1
14,550 + 0.2
14,551 - 0.2
14,552 + -0.4
14,552 + -0.1
14,552 + -1.6
14,561 + -0.2
14,567 - -0.5
14,567 - 1.5
14,570 + -0.3
14,571 - 0.7
14,571 - -0.8
14,572 + -0.2
14,572 + 3.4
14,573 + 0.9
14,576 + -1.7
14,576 - 0.6
14,579 + 0.0
14,582 - 0.9
14,587 + 0.9
14,588 + 0.2
14,590 - -0.1
14,592 + 0.0
14,612 - 2.2
14,628 + -1.1
14,634 + -0.6
14,636 - 0.4
14,654 + 1.6
14,656 - -1.1
14,662 + 0.5
14,662 - 0.5
14,669 + 0.2
14,675 + 1.3
14,675 + 0.6
14,676 - 0.3
14,701 - 0.2
14,718 - 1.6
14,727 - -0.1
14,729 + 0.9
14,745 + 0.7
14,763 - 2.1
14,770 + 0.3
14,787 + 0.0
14,800 - 0.6
14,805 + 0.2
14,828 + -0.8
14,828 + 0.2
14,832 - 1.0
14,833 - -0.8
14,850 - 0.1
14,922 - 1.3
14,929 + -0.0
14,932 + 0.3
14,954 - -1.2
14,958 - -0.8
14,959 + 0.3
14,968 + 1.3
14,972 + 0.5
14,975 + 0.2
14,976 + -0.0
14,982 - 0.8
14,983 - 0.3
14,983 + 1.4
14,986 - -0.2
14,992 + 0.4
14,999 + 0.9
15,002 - 1.2
15,015 - 0.1
15,043 + 0.1
15,048 - 0.4
15,048 - 0.6
15,048 - 0.6
15,049 - 2.4
15,053 - 0.4
15,054 + -0.8
15,054 - 0.6
15,056 - 1.0
15,066 + -1.0
15,071 + 0.7
15,073 + 0.9
15,077 - 0.7
15,097 - -1.0
15,104 + 0.3
15,161 + -0.3
15,162 - 0.1
15,174 - -0.4
15,197 + -1.5
15,206 - -0.1
15,208 - -0.3
15,211 - 0.6
15,230 + -0.9
15,241 + 0.8
15,247 - 0.2
15,248 - 1.2
15,254 + 0.5
15,255 + 1.2
15,255 + 2.0
15,258 - 0.5
15,260 + 0.5
15,266 - -1.1
15,269 + 2.4
15,272 + -0.0
15,276 - 0.4
15,280 - -0.0
15,286 - 0.3
15,288 - 0.6
15,320 - -1.2
15,333 - 0.3
15,335 - 0.8
15,367 - 2.1
15,381 + 1.2
15,385 - -1.3
15,405 - -0.1
15,413 + 0.5
15,426 + -0.3
15,444 + -0.4
15,476 + -0.6
15,520 - -0.9
15,520 - 1.3
15,552 - 0.3
15,555 + 0.0
15,557 + 0.1
15,561 + -0.8
15,562 - 1.9
15,563 - -0.8
15,570 + 0.7
15,576 - 0.2
15,576 - 1.9
15,579 - 3.0