Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2666

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2665: 11033 - HMMPfam-Protein of unknown function (DUF3431)-PF11913, at 712409 to 714651 11033 mRNA_2666: 11034 - HMMPfam-Lipase (class 3)-PF01764,SUPERFAMILY--SSF53474, at 715009 to 717266 11034 mRNA_2667: 11035 - K05535 MNN2 alpha 1,2-mannosyltransferase, at 717860 to 720887 11035

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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714,658 + 1.1
714,969 + 1.1
715,691 + 11034 mRNA_2666 0.30 0.1
715,720 + 11034 mRNA_2666 0.31 1.1
715,807 + 11034 mRNA_2666 0.35 -0.6
715,825 - 11034 mRNA_2666 0.36 1.6
715,958 + 11034 mRNA_2666 0.42 -0.7
715,959 - 11034 mRNA_2666 0.42 -2.5
715,997 + 11034 mRNA_2666 0.44 -0.3
716,376 - 11034 mRNA_2666 0.61 -1.2
716,579 + 11034 mRNA_2666 0.70 1.3
716,597 - 11034 mRNA_2666 0.70 0.7
716,602 + 11034 mRNA_2666 0.71 -0.2
716,699 + 11034 mRNA_2666 0.75 -0.0
716,707 - 11034 mRNA_2666 0.75 1.7
716,759 + 11034 mRNA_2666 0.78 0.7
716,762 + 11034 mRNA_2666 0.78 0.8
716,776 + 11034 mRNA_2666 0.78 0.5
716,894 - 11034 mRNA_2666 0.83 0.3
716,924 - 11034 mRNA_2666 0.85 -0.4
716,953 - 11034 mRNA_2666 0.86 0.1
717,048 - 0.2
717,069 + 0.1
717,107 - -1.0
717,216 + 0.1
717,226 - 0.9
717,229 - -0.3
717,230 + 1.7
717,231 - -0.1
717,243 - -0.4
717,243 - 1.2
717,245 - 0.3
717,245 - -0.1
717,248 + 0.3
717,248 - 2.7
717,250 - -0.2
717,251 + 0.7
717,253 + -0.0
717,258 + 0.3
717,268 - 0.5
717,272 + -0.7
717,275 - 0.2
717,279 + -0.3
717,279 + 0.8
717,279 + 1.9
717,303 + 0.4
717,326 + 1.3
717,354 + 0.7
717,426 + 0.2
717,438 - 0.8
717,443 + 2.0
717,447 + 0.9
717,448 - 0.8
717,449 + 1.0
717,456 - 0.4
717,456 - -0.5
717,456 - 1.1
717,466 + -0.0
717,595 - 0.1
717,597 - 1.0
717,622 + 1.7
717,633 + -1.0
717,645 - 0.7
717,649 - 0.5
717,656 + 0.6
717,668 - -1.1
717,791 + -1.8
717,798 - -0.4
717,807 + -0.2
717,809 + -0.8
717,915 + 0.9
718,111 + 0.9
718,226 - 11035 mRNA_2667 0.12 1.4