Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2655

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2654: 11022 - K00864 glpK, GK glycerol kinase, at 685161 to 688307 11022 mRNA_2655: 11023 - HMMPfam-Protein of unknown function (DUF1479)-PF07350,SUPERFAMILY--SSF51197, at 688711 to 690606 11023 mRNA_2656: 11024 - KOG3417 Ras1 guanine nucleotide exchange factor, at 690754 to 695161 11024

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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688,160 + -0.5
688,230 - 0.1
688,323 + 0.8
688,374 - 0.1
688,410 - 0.2
688,573 - 0.9
688,574 - -0.1
688,577 - 0.0
688,582 + -1.9
688,593 + 0.4
688,594 - -0.1
688,597 - 1.0
688,610 + 0.1
688,627 + 1.1
688,645 + -0.6
688,645 + 0.5
688,662 - 0.3
688,687 - -0.4
688,776 - 1.9
688,781 + 0.9
689,121 + 11023 mRNA_2655 0.22 0.1
689,372 + 11023 mRNA_2655 0.35 -1.5
689,658 + 11023 mRNA_2655 0.50 1.9
689,924 - 11023 mRNA_2655 0.64 -0.7
690,135 - 11023 mRNA_2655 0.75 1.4
690,446 - 0.9
690,581 + 1.8
690,890 + 0.3
691,054 - 1.1
691,308 + 11024 mRNA_2656 0.13 0.9
691,348 + 11024 mRNA_2656 0.13 1.4
691,474 + 11024 mRNA_2656 0.16 3.0
691,511 + 11024 mRNA_2656 0.17 0.1
691,599 - 11024 mRNA_2656 0.19 0.4