Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2600

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2599: 10967 - KOG2619 Fucosyltransferase, at 567541 to 568045 10967 mRNA_2600: 10968 - HMMPfam-GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p-PF13839, at 568894 to 570450 10968 mRNA_2601: 10969 - Hypothetical Protein, at 570670 to 572190 10969

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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568,000 + -0.5
568,116 - 0.8
568,138 - 1.3
568,143 - 0.1
568,152 - 0.8
568,154 + 0.7
568,175 + -0.1
568,177 - 0.3
568,179 - -1.8
568,181 - 0.7
568,185 + 1.2
568,190 - 1.0
568,197 + 0.2
568,201 - 0.4
568,205 - 0.7
568,216 + -0.3
568,297 - 0.4
568,306 - -0.2
568,317 - 0.8
568,331 + 0.6
568,353 - -0.4
568,361 - 1.0
568,414 - 0.4
568,453 + 0.0
568,498 - 0.4
568,587 - 1.0
568,782 - 0.2
568,783 + 0.8
568,904 - -0.7
568,932 + 0.2
568,946 - -0.5
568,948 - 0.7
568,951 + 0.2
568,957 + -0.5
568,957 + 0.5
568,958 - 0.4
568,958 - 0.3
568,964 - 0.6
568,965 + -0.4
568,968 + 1.1
568,968 - 0.5
568,971 + 1.5
568,971 + 0.1
568,971 + 0.2
568,971 - 0.7
568,971 + -0.9
568,971 + 0.2
568,975 - -0.1
568,976 + 0.1
568,978 + 0.7
568,980 + -0.6
568,983 - -0.6
568,984 - 0.9
568,986 + 0.9
568,986 - 0.1
568,990 - 0.4
568,990 + -0.6
568,992 - -0.3
568,993 + -1.9
568,993 + 1.2
568,994 + 0.8
568,996 + 0.2
568,997 + 0.7
568,997 + 0.7
568,999 + 0.7
569,002 + 1.0
569,004 + -0.1
569,006 + -1.6
569,018 - 0.0
569,163 - 10968 mRNA_2600 0.17 0.5
569,166 + 10968 mRNA_2600 0.17 1.9
569,168 + 10968 mRNA_2600 0.18 1.6
569,168 + 10968 mRNA_2600 0.18 -0.5
569,281 + 10968 mRNA_2600 0.25 0.9
569,301 + 10968 mRNA_2600 0.26 0.3
569,461 + 10968 mRNA_2600 0.36 -0.5
569,467 + 10968 mRNA_2600 0.37 1.3
569,475 - 10968 mRNA_2600 0.37 0.2
569,730 - 10968 mRNA_2600 0.54 2.6
569,747 + 10968 mRNA_2600 0.55 -0.1
570,162 + 10968 mRNA_2600 0.81 -0.2
570,188 - 10968 mRNA_2600 0.83 0.1
570,465 - -0.2
570,472 - 0.1
570,552 + 1.9
570,598 - 0.1
570,626 + 1.5
570,777 - 1.2
570,914 - 10969 mRNA_2601 0.16 0.7
570,917 + 10969 mRNA_2601 0.16 0.1
570,919 - 10969 mRNA_2601 0.16 1.9
570,926 + 10969 mRNA_2601 0.17 0.5
571,048 + 10969 mRNA_2601 0.25 -1.6
571,058 + 10969 mRNA_2601 0.26 -1.1
571,070 + 10969 mRNA_2601 0.26 -0.5
571,197 - 10969 mRNA_2601 0.35 1.8
571,219 + 10969 mRNA_2601 0.36 0.2