Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2539

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2538: 10906 - SUPERFAMILY--SSF56112, at 393822 to 395821 10906 mRNA_2539: 10907 - Hypothetical Protein, at 396094 to 398437 10907 mRNA_2540: 10908 - SUPERFAMILY--SSF52058, at 398635 to 399613 10908

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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395,138 - 10906 mRNA_2538 0.66 2.7
395,441 + 10906 mRNA_2538 0.81 -0.5
395,554 - 10906 mRNA_2538 0.87 -0.1
395,578 + 10906 mRNA_2538 0.88 -1.9
395,600 + 10906 mRNA_2538 0.89 0.4
395,608 + 10906 mRNA_2538 0.89 0.6
395,610 - 10906 mRNA_2538 0.89 0.1
395,747 + 0.8
395,794 + -0.4
395,926 + 0.9
396,024 + -0.7
396,048 - -1.0
396,172 + 0.3
396,180 - 0.5
396,196 - -1.4
396,196 - -0.2
396,208 + 0.6
396,367 + 10907 mRNA_2539 0.12 -0.6
396,464 + 10907 mRNA_2539 0.16 -0.1
396,528 + 10907 mRNA_2539 0.19 -0.8
396,871 + 10907 mRNA_2539 0.33 -0.2
396,917 - 10907 mRNA_2539 0.35 0.5
396,951 - 10907 mRNA_2539 0.37 -0.6
397,022 + 10907 mRNA_2539 0.40 -0.7
397,658 + 10907 mRNA_2539 0.67 -0.0
397,921 + 10907 mRNA_2539 0.78 -0.4
397,927 + 10907 mRNA_2539 0.78 -0.6
398,070 + 10907 mRNA_2539 0.84 -1.3
398,075 - 10907 mRNA_2539 0.85 0.7
398,288 + 1.7
398,364 + 0.4
398,406 - 0.3
398,515 + -0.1
398,515 + 0.3
398,618 + 3.1
398,635 - 0.5
398,792 + 10908 mRNA_2540 0.16 -0.1
398,798 - 10908 mRNA_2540 0.17 1.1
398,846 - 10908 mRNA_2540 0.22 -1.6
398,867 - 10908 mRNA_2540 0.24 1.4
398,908 - 10908 mRNA_2540 0.28 2.0
398,949 - 10908 mRNA_2540 0.32 -3.1
399,077 - 10908 mRNA_2540 0.45 0.3
399,265 - 10908 mRNA_2540 0.64 0.4
399,380 - 10908 mRNA_2540 0.76 -0.4
399,434 + 10908 mRNA_2540 0.82 2.2