Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2517

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2517: 10885 - K01078 E3.1.3.2 acid phosphatase, at 337169 to 339877 10885 mRNA_2518: 10886 - K03189 ureG urease accessory protein, at 340022 to 341494 10886

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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336,208 + 1.6
336,226 - 0.3
336,233 - -0.6
336,236 + -1.2
336,239 - -0.2
336,240 - 1.9
336,243 + 0.2
336,337 + -1.4
336,338 - -0.2
336,339 - -0.3
336,340 + 1.4
336,341 - 0.1
336,349 + 0.5
336,375 + -0.7
336,376 + 0.8
336,379 + -0.9
336,382 + -0.8
336,405 + 0.6
336,410 + 0.6
336,414 + -0.6
336,414 + 0.3
336,429 + -0.1
336,432 - 0.6
336,445 - 1.9
336,453 + -0.7
336,456 + -1.6
336,480 + -0.3
336,482 + 1.9
336,519 + 0.1
336,533 - -0.5
336,541 + 0.4
336,544 - 0.2
336,559 + 3.0
336,564 - -0.6
336,564 - -0.3
336,575 + 0.4
336,587 + 1.5
336,593 - 0.1
336,597 + 0.1
336,604 + 0.2
336,614 + -1.2
336,616 + 0.1
336,621 - -0.7
336,644 - -0.2
336,651 + 2.1
336,657 - 0.0
336,693 + 1.3
336,724 - 1.0
336,728 - 0.9
336,732 - 0.1
336,747 + -0.3
336,849 - 0.3
336,852 + 0.4
336,874 - -0.2
336,885 + 0.4
336,951 - 0.7
337,005 + 0.2
337,109 + 1.5
337,132 - -0.6
337,249 - -3.3
337,297 - -0.3
337,310 + 1.7
337,406 + 0.5
338,594 - 10885 mRNA_2517 0.53 -0.1
338,610 - 10885 mRNA_2517 0.53 1.6
338,725 - 10885 mRNA_2517 0.57 -0.8
338,745 + 10885 mRNA_2517 0.58 0.0
338,870 + 10885 mRNA_2517 0.63 0.7
339,151 - 10885 mRNA_2517 0.73 3.8
339,157 - 10885 mRNA_2517 0.73 -0.3
339,170 - 10885 mRNA_2517 0.74 1.5
339,177 + 10885 mRNA_2517 0.74 1.6
339,185 + 10885 mRNA_2517 0.74 1.4
339,218 - 10885 mRNA_2517 0.76 1.7
339,222 + 10885 mRNA_2517 0.76 0.9
339,224 - 10885 mRNA_2517 0.76 0.4
339,230 + 10885 mRNA_2517 0.76 0.9
339,230 - 10885 mRNA_2517 0.76 -0.2
339,234 + 10885 mRNA_2517 0.76 -0.1
339,239 - 10885 mRNA_2517 0.76 -0.6
339,242 - 10885 mRNA_2517 0.77 -1.2
339,243 + 10885 mRNA_2517 0.77 -0.8
339,252 - 10885 mRNA_2517 0.77 -0.6
339,279 + 10885 mRNA_2517 0.78 -0.5
339,367 - 10885 mRNA_2517 0.81 -0.4
339,368 - 10885 mRNA_2517 0.81 -1.0
339,381 - 10885 mRNA_2517 0.82 0.6
339,491 + 10885 mRNA_2517 0.86 -0.1
339,798 - 0.6
339,909 - 2.2
339,938 + 0.2
339,939 + 0.2
339,942 - -1.7
339,946 - 1.1
339,947 + 0.9
339,951 + 1.0
339,951 - 0.6
339,953 + 0.4
339,959 + 0.5
339,963 + -0.2
340,104 - 0.0
340,112 + 0.4
340,147 + 0.7
340,244 + 10886 mRNA_2518 0.15 0.6
340,259 + 10886 mRNA_2518 0.16 0.3
340,408 + 10886 mRNA_2518 0.26 0.7
340,537 + 10886 mRNA_2518 0.35 -0.3
340,822 - 10886 mRNA_2518 0.54 2.8