Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2468

Experiments: YNB Glucose 75mM Methionine

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2468: 10836 - HMMPfam-Protein of unknown function (DUF3605)-PF12239, at 219439 to 220603 10836 mRNA_2469: 10837 - K12479 VPS45 vacuolar protein sorting-associated protein 45, at 220878 to 223726 10837

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
remove
218,456 + 1.4
218,482 - 0.3
218,506 + -3.1
218,507 - -2.4
218,561 + 1.2
218,561 + 2.7
218,570 + 2.7
218,573 + -0.4
218,594 + 0.8
218,609 - 1.9
218,642 - 0.2
218,651 + -0.1
218,657 - -0.2
218,659 + 0.1
218,671 - 0.6
218,677 - 1.1
218,747 - -0.6
218,766 - -0.3
218,788 - 0.1
218,794 - 0.2
218,802 + 0.4
218,817 - 0.1
218,830 + 1.2
218,924 - 0.1
218,926 + 0.6
218,947 - 0.6
218,951 - 1.2
218,952 - 0.2
218,954 - 0.8
218,961 - 0.2
218,962 - -1.1
218,969 + 0.6
219,087 - -0.7
219,229 - -0.1
219,239 - -0.2
219,260 + -0.3
219,260 + -0.2
219,260 + 0.4
219,264 - 0.7
219,369 + -0.3
219,373 + 0.5
219,387 - -1.8
219,393 + -0.6
219,402 + -0.1
219,946 - 10836 mRNA_2468 0.44 -1.0
220,084 + 10836 mRNA_2468 0.55 1.5
220,375 - 10836 mRNA_2468 0.80 -0.0
220,391 - 10836 mRNA_2468 0.82 -0.6
220,498 - -0.2
220,539 + -0.6
220,608 - 0.4
220,650 - 0.6
220,651 + -0.2
220,823 + 0.2
220,995 - 1.6