Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2405

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2405: 10773 - KOG1910 Uncharacterized conserved protein, at 41181 to 51337 10773 mRNA_2406: 10774 - KOG4111 Translocase of outer mitochondrial membrane complex, subunit TOM22, at 52047 to 52986 10774

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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40,281 - 0.3
40,456 + -0.9
40,475 + 0.1
40,614 - 0.9
40,741 - 0.9
40,754 - -0.0
40,765 + -2.0
40,767 - 0.8
40,782 - 0.9
40,786 + 1.1
40,807 - -0.8
40,813 + 1.5
40,815 + 1.2
40,883 - 0.2
40,913 - 1.2
40,962 + -0.0
41,050 + 2.9
41,087 - 2.3
41,090 + 0.8
41,108 + 0.6
41,128 + 0.2
41,210 - 1.4
41,248 - 0.8
41,395 + -0.9
41,408 + 1.8
41,704 + 1.1
41,854 - 2.4
41,983 + 0.8
42,008 - 0.8
42,286 - 10773 mRNA_2405 0.11 3.3
42,295 - 10773 mRNA_2405 0.11 0.5
42,437 - 10773 mRNA_2405 0.12 2.6
42,560 - 10773 mRNA_2405 0.14 1.1
42,745 + 10773 mRNA_2405 0.15 1.8
42,757 - 10773 mRNA_2405 0.16 1.0
43,054 - 10773 mRNA_2405 0.18 0.7
43,129 - 10773 mRNA_2405 0.19 1.3
43,135 + 10773 mRNA_2405 0.19 1.1
43,435 - 10773 mRNA_2405 0.22 0.9
43,439 + 10773 mRNA_2405 0.22 0.6
43,465 - 10773 mRNA_2405 0.22 3.0
43,548 - 10773 mRNA_2405 0.23 1.8
43,639 - 10773 mRNA_2405 0.24 2.5
43,698 - 10773 mRNA_2405 0.25 1.0
43,737 - 10773 mRNA_2405 0.25 1.4
43,770 - 10773 mRNA_2405 0.25 2.6
43,851 + 10773 mRNA_2405 0.26 3.0
43,891 + 10773 mRNA_2405 0.27 1.7
43,891 + 10773 mRNA_2405 0.27 2.3
44,284 + 10773 mRNA_2405 0.31 1.2
44,293 + 10773 mRNA_2405 0.31 1.3
44,312 - 10773 mRNA_2405 0.31 1.0
44,318 - 10773 mRNA_2405 0.31 1.4
44,327 - 10773 mRNA_2405 0.31 1.0
44,343 + 10773 mRNA_2405 0.31 0.4
44,417 - 10773 mRNA_2405 0.32 0.2
44,471 + 10773 mRNA_2405 0.32 1.6
44,648 - 10773 mRNA_2405 0.34 2.8
44,748 - 10773 mRNA_2405 0.35 1.2
44,887 + 10773 mRNA_2405 0.36 3.1
44,954 + 10773 mRNA_2405 0.37 1.2
44,993 - 10773 mRNA_2405 0.38 3.5
45,052 - 10773 mRNA_2405 0.38 2.9
45,067 - 10773 mRNA_2405 0.38 0.7
45,159 - 10773 mRNA_2405 0.39 0.2
45,232 - 10773 mRNA_2405 0.40 1.3
45,243 + 10773 mRNA_2405 0.40 1.6
45,280 - 10773 mRNA_2405 0.40 -0.1
45,676 - 10773 mRNA_2405 0.44 0.5
45,774 - 10773 mRNA_2405 0.45 1.3
45,789 + 10773 mRNA_2405 0.45 2.7
45,879 - 10773 mRNA_2405 0.46 1.8
45,942 + 10773 mRNA_2405 0.47 2.2
45,960 - 10773 mRNA_2405 0.47 1.3
46,009 - 10773 mRNA_2405 0.48 2.1
46,074 + 10773 mRNA_2405 0.48 2.6
46,082 - 10773 mRNA_2405 0.48 1.4
46,308 - 10773 mRNA_2405 0.50 -0.3
46,315 - 10773 mRNA_2405 0.51 0.9
46,656 + 10773 mRNA_2405 0.54 1.7
46,792 - 10773 mRNA_2405 0.55 1.3
46,795 + 10773 mRNA_2405 0.55 0.4
46,805 + 10773 mRNA_2405 0.55 1.4
46,816 + 10773 mRNA_2405 0.55 2.3
47,100 + 10773 mRNA_2405 0.58 0.5
47,186 + 10773 mRNA_2405 0.59 1.9
47,196 + 10773 mRNA_2405 0.59 0.3
47,324 - 10773 mRNA_2405 0.60 2.0
47,338 + 10773 mRNA_2405 0.61 0.6
47,450 - 10773 mRNA_2405 0.62 2.4
47,486 - 10773 mRNA_2405 0.62 1.6
47,631 - 10773 mRNA_2405 0.64 1.2
47,639 - 10773 mRNA_2405 0.64 2.1
47,655 + 10773 mRNA_2405 0.64 3.6
47,895 - 10773 mRNA_2405 0.66 0.7
47,898 + 10773 mRNA_2405 0.66 1.6
47,949 - 10773 mRNA_2405 0.67 1.1
47,999 + 10773 mRNA_2405 0.67 0.7
48,026 + 10773 mRNA_2405 0.67 1.7
48,153 - 10773 mRNA_2405 0.69 1.2
48,314 + 10773 mRNA_2405 0.70 1.1
48,834 - 10773 mRNA_2405 0.75 0.7
48,843 + 10773 mRNA_2405 0.75 0.9
48,963 + 10773 mRNA_2405 0.77 1.9
49,153 - 10773 mRNA_2405 0.78 1.8
49,253 - 10773 mRNA_2405 0.79 -0.7
49,273 + 10773 mRNA_2405 0.80 3.0
49,729 + 10773 mRNA_2405 0.84 1.6
49,931 - 10773 mRNA_2405 0.86 1.3
49,936 + 10773 mRNA_2405 0.86 0.0
50,062 + 10773 mRNA_2405 0.87 2.7
50,185 + 10773 mRNA_2405 0.89 1.1
50,284 - 10773 mRNA_2405 0.90 2.0
50,528 - 1.9
50,537 + -0.2
50,697 - 1.0
50,708 - 1.1
50,716 + 1.6
51,127 + 2.4
51,127 + 2.6
51,270 + 0.9
51,387 - 1.1
51,393 - 0.6
51,397 + 1.0
51,419 - -0.3
51,421 - 0.2
51,531 - -0.7
51,564 + -0.3
51,567 + 1.6
51,712 - -0.5
51,933 - -1.0
51,976 + -0.3
52,120 - -1.3