Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2330

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2330: 10698 - KOG0583 Serine/threonine protein kinase, at 627828 to 630238 10698

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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626,888 - 0.2
626,891 - 0.2
626,996 + 2.1
627,025 - 0.5
627,030 + 0.1
627,054 + 1.9
627,172 - -0.2
627,172 + 1.1
627,189 + 0.6
627,196 - 1.7
627,213 - 1.4
627,312 - -1.5
627,324 + -0.1
627,353 - 1.2
627,373 + -3.1
627,379 + 0.9
627,487 - 2.2
627,508 + -0.2
627,609 - 0.1
627,648 + -0.1
627,665 + 0.4
627,665 + -1.1
627,683 - 1.0
627,907 - 0.1
628,826 - 10698 mRNA_2330 0.41 0.0
629,401 + 10698 mRNA_2330 0.65 0.0
629,519 - 10698 mRNA_2330 0.70 -0.1
630,117 - 1.7
630,247 + -0.6
630,268 + 1.5
630,271 - 1.0
630,274 - 0.5
630,275 - 0.8
630,288 + 2.6
630,409 - -0.6
630,427 - -1.7
630,434 + 1.0
630,445 - 0.7
630,460 + -0.7
630,467 + 1.6
630,474 + -1.4
630,582 + 0.7
630,588 + -2.8
630,592 - 0.7
630,601 - 1.5
630,602 + 1.2
630,603 - 0.3
630,604 + -0.3
630,605 - 0.0
630,607 - 0.6
630,608 + 0.5
630,608 - 1.2
630,609 + -0.1
630,611 - -2.5
630,613 - 0.1
630,616 - 0.4
630,617 + -0.9
630,620 + -0.6
630,620 + 0.3
630,620 - 0.4
630,621 + 0.8
630,622 + -0.4
630,622 + 0.7
630,622 + -1.3
630,625 + 0.7
630,656 + 0.6
630,658 - -0.6
630,678 + -0.2
630,709 - 1.6
630,710 - 1.2
630,710 + -1.6
630,714 - -0.4
630,727 - 0.5
630,731 - 1.3
630,732 - -1.3
630,734 + 0.7
630,735 - 2.4
630,736 + -0.1
630,736 - -1.6
630,739 - -0.1
630,750 + 2.3
630,751 - -0.1
630,755 - 0.3
630,755 + 1.1
630,757 - -1.7
630,760 - 0.7
630,764 + -0.1
630,766 + 1.8
630,767 + 0.7
630,767 + -0.3
630,771 + -0.0
630,780 + 0.2
630,985 - -0.3
631,022 - 0.2
631,032 - -0.6
631,049 - -2.0
631,053 - 0.0
631,055 + 1.4
631,058 + 0.1
631,060 - 0.2
631,070 + -1.5
631,092 + 0.8
631,130 - 0.8