Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2322

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2321: 10689 - K14807 DDX51, DBP6 ATP-dependent RNA helicase DDX51/DBP6, at 604206 to 606574 10689 mRNA_2322: 10690 - Hypothetical Protein, at 606743 to 609720 10690

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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606,669 + 0.9
607,269 + 10690 mRNA_2322 0.18 0.5
607,390 - 10690 mRNA_2322 0.22 -0.2
607,497 - 10690 mRNA_2322 0.25 -0.1
607,957 - 10690 mRNA_2322 0.41 -2.0
607,978 + 10690 mRNA_2322 0.41 -0.1
608,215 - 10690 mRNA_2322 0.49 2.0
608,541 + 10690 mRNA_2322 0.60 1.0
608,600 - 10690 mRNA_2322 0.62 -1.2
608,660 - 10690 mRNA_2322 0.64 -1.7
608,685 - 10690 mRNA_2322 0.65 2.8
608,997 - 10690 mRNA_2322 0.76 -0.3
609,180 - 10690 mRNA_2322 0.82 0.4
609,309 - 10690 mRNA_2322 0.86 -1.2
609,315 + 10690 mRNA_2322 0.86 -1.3
609,603 - -0.1
609,651 - 1.5
609,729 - -1.6
609,750 + -0.2
609,763 + -0.9
609,763 + 0.7
609,770 + -1.4
609,860 - 0.7
609,874 - 1.2
609,890 - -0.2
609,897 - 0.7
609,899 + -0.5
609,916 + 2.3
609,918 + 1.5
610,012 + -0.9
610,026 + -1.0
610,036 - 0.9
610,042 - 0.6
610,043 + 1.2
610,045 - -2.2
610,045 - -0.8
610,046 + -0.9
610,075 + 1.7
610,087 + -0.1
610,087 - -0.6
610,091 + -0.6
610,095 + -0.4
610,096 + 1.0
610,097 - -1.0
610,100 + -1.1
610,103 - 0.3
610,104 - 0.2
610,106 - -0.8
610,107 + -0.9
610,111 - 1.5
610,114 + -0.1
610,114 - 1.5
610,117 - -1.1
610,120 + -2.0
610,120 - 0.0
610,122 + 0.9
610,126 + 0.4
610,129 - -0.4
610,129 + 0.4
610,129 + 0.2
610,129 + 0.3
610,135 + -0.2
610,141 - -0.7
610,144 + -0.2
610,146 + -2.5
610,149 + 1.4
610,149 + 0.2
610,153 + -0.2
610,154 - 0.9
610,169 - -0.0
610,181 - 0.3
610,182 - 0.3
610,185 - 1.4
610,187 - -1.4
610,188 - 0.5
610,190 - 0.7
610,190 - 0.1
610,194 - 0.3
610,194 + -0.4
610,208 - -0.7
610,216 + 0.6
610,245 - 0.1
610,257 + 0.9
610,301 - -1.0
610,311 + -1.0
610,315 - 1.9
610,323 - 0.9
610,356 + -1.0
610,365 - -0.6
610,385 - 1.7
610,415 - 1.5
610,439 - 3.0
610,460 - 2.4
610,466 - 1.1
610,467 - 1.4
610,477 - 1.0
610,477 - 0.8
610,489 + 0.5
610,506 + -0.4
610,518 - 0.7
610,537 - 0.5
610,558 - 0.8
610,589 - 1.0
610,606 + -0.7
610,610 - -0.3
610,650 + 0.1