Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2251

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2250: 10618 - HMMPfam-Apolipoprotein O-PF09769, at 464729 to 465798 10618 mRNA_2251: 10619 - KOG3313 Molecular chaperone Prefoldin, subunit 3, at 466202 to 467815 10619 mRNA_2252: 10620 - HMMPfam-Signal recognition particle 9 kDa protein (SRP9)-PF05486,SUPERFAMILY--SSF54762, at 468078 to 468584 10620

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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465,280 - 10618 mRNA_2250 0.51 0.1
465,325 + 10618 mRNA_2250 0.56 -0.4
465,446 - 10618 mRNA_2250 0.67 -0.4
465,560 - 10618 mRNA_2250 0.78 0.8
465,572 + 10618 mRNA_2250 0.79 -1.3
465,572 + 10618 mRNA_2250 0.79 1.2
465,736 - -0.2
465,742 + -1.1
465,744 + -0.2
465,992 + 1.9
465,993 - 0.5
466,010 + 0.1
466,029 - 2.2
466,142 - 0.7
466,158 + 0.8
466,699 + 10619 mRNA_2251 0.31 0.5
466,777 + 10619 mRNA_2251 0.36 -0.3
466,863 + 10619 mRNA_2251 0.41 -0.5
467,334 - 10619 mRNA_2251 0.70 -0.6
467,748 + -0.8
467,759 + 0.6
467,802 + -0.5
467,916 - 0.3
468,036 - -0.2
468,206 - 10620 mRNA_2252 0.25 2.6
468,629 + -3.0
468,794 + -0.9