Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2236

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2235: 10603 - K11843 USP14, UBP6 ubiquitin carboxyl-terminal hydrolase 14, at 430392 to 432550 10603 mRNA_2236: 10604 - KOG3098 Uncharacterized conserved protein, at 432656 to 434707 10604 mRNA_2237: 10605 - KOG1794 N-Acetylglucosamine kinase, at 435285 to 436613 10605

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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432,313 + 10603 mRNA_2235 0.89 2.3
432,792 - 0.9
432,861 + 0.5
433,025 - 10604 mRNA_2236 0.18 -1.4
433,062 + 10604 mRNA_2236 0.20 1.4
433,586 - 10604 mRNA_2236 0.45 1.6
433,736 - 10604 mRNA_2236 0.53 1.6
433,738 + 10604 mRNA_2236 0.53 0.4
433,858 + 10604 mRNA_2236 0.59 -0.1
434,165 - 10604 mRNA_2236 0.74 0.3
434,327 - 10604 mRNA_2236 0.81 -0.6
434,454 - 10604 mRNA_2236 0.88 -1.0
434,463 + 10604 mRNA_2236 0.88 -2.0
434,577 - 0.4
434,581 - 1.4
434,653 + 1.5
434,718 + 1.8
434,739 + 0.2
434,746 - 0.5
434,757 + 0.1
434,774 + 2.3
434,775 + 0.6
434,777 + 0.7
434,798 + -0.1
434,800 - -1.2
434,808 + 0.0
434,821 + -0.8
434,822 + -1.1
434,831 + 0.6
434,838 - 0.4
434,846 - 0.2
434,850 - 0.5
434,851 + 0.2
434,863 - 0.5
434,867 - 1.4
434,871 + 0.4
434,873 + 1.4
434,874 - 0.7
434,875 - -0.2
434,877 + 1.2
434,883 - 0.3
434,886 - 2.1
434,893 - 0.3
434,898 - -0.7
434,900 - 0.6
434,902 + 0.6
434,904 - -0.0
434,910 - 0.3
434,915 + 0.7
434,921 + -1.6
434,924 - -0.8
434,925 + -1.1
434,929 - 0.2
434,929 + -0.1
434,934 - -0.2
434,935 - 1.1
434,935 + 0.8
434,936 - -0.6
434,938 - 1.0
434,942 - -1.3
434,943 - 1.9
434,947 + 0.7
434,950 - -0.7
434,953 - 1.6
434,966 + -0.0
434,989 - 0.4
434,998 - 1.0
435,070 - 0.5
435,080 + -0.1
435,095 - -0.7
435,098 - 1.3
435,407 + 0.0