Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2227

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2226: 10594 - SMART-SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains-SM00717, at 405486 to 409218 10594 mRNA_2227: 10595 - K12392 AP1B1 AP-1 complex subunit beta-1, at 409342 to 412255 10595 mRNA_2228: 10596 - K14191 DIM1 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase, at 412387 to 413949 10596

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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409,228 - -0.5
409,239 + -0.3
409,361 - 0.1
409,364 - -0.2
409,897 + 10595 mRNA_2227 0.19 -1.0
409,919 + 10595 mRNA_2227 0.20 1.2
410,931 - 10595 mRNA_2227 0.55 0.9
412,306 - -0.6
412,309 + 0.3
412,315 + 0.6
412,319 + -1.2
412,335 + -0.4
412,353 - 0.1