Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2061

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2060: 10428 - K05824 LYS12 homoisocitrate dehydrogenase, at 855890 to 857453 10428 mRNA_2061: 10429 - HMMPfam-Protein of unknown function (DUF1640)-PF07798, at 857800 to 859276 10429 mRNA_2062: 10430 - K06210 NMNAT nicotinamide mononucleotide adenylyltransferase, at 860040 to 861424 10430

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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857,044 + 10428 mRNA_2060 0.74 -2.3
857,100 - 10428 mRNA_2060 0.77 -1.8
857,125 - 10428 mRNA_2060 0.79 -1.9
857,222 + 10428 mRNA_2060 0.85 -3.8
857,368 - -3.2
857,393 - -2.5
857,528 - -0.1
857,667 - -0.6
857,813 - 0.7
857,815 + 0.8
857,831 + 0.8
858,388 + 10429 mRNA_2061 0.40 0.4
858,706 + 10429 mRNA_2061 0.61 0.2
859,011 + 10429 mRNA_2061 0.82 0.7
859,036 + 10429 mRNA_2061 0.84 0.9
859,284 - 1.2
859,294 + 0.1
859,426 - 0.1
859,440 - 0.5
859,444 - 0.4
859,448 + 0.4
859,580 + 1.4
859,598 + -2.8
859,717 - -0.2
859,727 - -1.7
859,727 - -1.3
859,833 - 1.1
859,880 - 1.4
859,992 - 2.7
860,009 + -0.6
860,158 + -0.6