Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1937

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1936: 10304 - K07424 CYP3A cytochrome P450, family 3, subfamily A, at 551220 to 553834 10304 mRNA_1937: 10305 - K18342 OTUD6 OTU domain-containing protein 6, at 554394 to 556031 10305 mRNA_1938: 10306 - HMMPfam-Amidohydrolase family-PF07969,SUPERFAMILY--SSF51338,SUPERFAMILY--SSF51556, at 556583 to 558262 10306

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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553,466 + 10304 mRNA_1936 0.86 0.4
553,727 - -1.2
553,734 - 0.6
553,865 + 0.1
553,868 + -0.9
553,890 - 0.1
553,893 + -1.6
553,903 + 0.7
553,909 - 1.7
553,916 + -0.7
553,945 - 0.4
553,981 - -1.5
554,011 + 1.6
554,025 + 0.8
554,029 - 1.1
554,038 - -0.7
554,040 + -1.7
554,040 + -0.0
554,046 + 0.3
554,064 + 0.4
554,069 + 0.9
554,074 + 0.6
554,084 + -0.2
554,096 + 0.7
554,105 + 0.3
554,147 - -0.2
554,147 - 0.8
554,149 - 0.5
554,165 - 1.9
554,165 - 0.4
554,165 + -0.4
554,174 - 0.5
554,185 + -0.5
554,326 - 0.4
554,334 - -0.8
554,336 + 0.5
554,349 + 0.3
554,350 + -0.8
554,361 + -1.2
554,367 + -1.9
554,470 + -0.4
554,816 - 10305 mRNA_1937 0.26 -0.6
555,084 - 10305 mRNA_1937 0.42 -1.6
556,233 + 1.8
556,233 - -0.2
556,259 - -0.9
556,395 - 0.5
556,401 - 1.3
556,431 + 0.7
556,535 + -0.2
556,538 + 1.3
556,546 + 2.6
556,691 - 0.6
556,879 - 10306 mRNA_1938 0.18 0.7
556,948 + 10306 mRNA_1938 0.22 -0.1
556,995 + 10306 mRNA_1938 0.25 0.7