Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1841

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1841: 10209 - KOG4476 Gluconate transport-inducing protein, at 342756 to 344236 10209 mRNA_1842: 10210 - K08660 CNDP2 cytosolic nonspecific dipeptidase, at 344816 to 347199 10210

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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341,780 - 1.3
341,783 + 0.1
341,788 + 0.1
341,790 - -0.1
341,796 - -1.2
341,824 - -0.0
341,825 - 0.2
341,846 - 0.0
341,847 + 0.1
341,849 - 1.2
341,853 - 0.8
341,857 + 1.4
341,866 + -0.6
341,868 - -0.4
341,869 + 1.2
341,871 + 1.0
341,880 + 0.5
341,889 - 0.8
341,889 + 0.0
341,889 - 0.5
341,892 + -1.1
341,892 + 0.6
341,892 + 0.1
341,904 - 0.7
341,908 - 1.1
341,908 - 2.4
341,908 - -0.3
341,908 + -0.0
341,909 - 1.9
341,909 + 0.5
341,911 + 0.6
341,911 + -0.6
341,916 + 0.6
341,921 - 0.6
341,922 + -0.5
341,924 - 0.8
341,924 + -0.3
341,925 + -1.3
341,928 + 0.1
341,942 - 1.0
341,952 - 0.3
341,969 + 0.3
341,974 + 0.2
341,993 + -1.0
341,994 + 1.0
342,016 - 2.5
342,018 - -1.2
342,025 - 0.6
342,027 + 0.4
342,029 + 0.1
342,034 - 0.7
342,054 - 1.1
342,071 + 0.2
342,076 + -0.7
342,082 + 0.7
342,090 - 0.8
342,097 - 0.2
342,099 + -1.1
342,108 + 0.6
342,122 - 1.8
342,141 - 2.1
342,142 + 2.4
342,155 - -0.3
342,160 + -0.3
342,160 + -0.7
342,175 + 1.0
342,175 + 0.6
342,187 - 1.2
342,222 + -0.8
342,238 + 1.5
342,239 - -0.5
342,240 + 1.3
342,254 + -0.1
342,269 - -0.5
342,370 - 0.7
342,371 - 0.1
342,374 + -0.9
342,376 + -1.2
342,381 + -0.4
342,383 + 1.9
342,386 - -0.8
342,390 - -0.9
342,392 + 2.0
342,394 + 2.9
342,396 - -0.3
342,398 - 1.6
342,400 + 0.4
342,422 + -0.1
342,425 - 1.7
342,437 - 1.3
342,438 - 0.4
342,449 - 0.8
342,450 - -0.3
342,451 - 0.6
342,455 - -1.0
342,458 + 0.3
342,458 + 0.3
342,463 - -0.7
342,467 - 0.7
342,468 + -0.2
342,475 + 2.8
342,482 - 0.8
342,486 - 0.8
342,491 + -1.0
342,493 - 0.4
342,506 + 0.2
342,514 + 3.3
342,519 - 0.6
342,528 + -1.3
342,531 - 1.0
342,531 + 0.4
342,554 + 0.5
342,562 + -0.3
342,566 - -0.6
342,566 + -0.2
342,577 + 0.6
342,577 + -0.7
342,605 - 0.3
342,609 - 0.6
342,621 - 0.3
342,627 - 0.1
342,637 - 1.2
342,702 - 0.6
342,708 - 0.6
342,803 + 3.7
342,808 - -0.2
342,815 - -0.3
342,818 + 1.8
342,824 + 1.2
342,826 + 0.0
342,840 + 0.3
342,861 + -0.0
342,975 + 10209 mRNA_1841 0.15 0.8
343,087 - 10209 mRNA_1841 0.22 -0.1
343,121 + 10209 mRNA_1841 0.25 0.1
343,140 + 10209 mRNA_1841 0.26 0.7
343,284 - 10209 mRNA_1841 0.36 1.3
343,296 + 10209 mRNA_1841 0.36 2.4
343,539 + 10209 mRNA_1841 0.53 -0.1
343,715 - 10209 mRNA_1841 0.65 2.1
344,164 - -0.4
344,262 - 1.1
344,331 - 0.1
344,560 - 2.8
344,567 + -3.2
344,583 - -1.5
344,590 - -0.7
344,610 - 1.1
344,643 - 0.8
344,653 + 1.5
344,691 + 0.3
344,693 - -2.6
344,704 + -0.1
344,704 - 1.0
344,727 + -0.7
344,748 + 1.0
344,863 - 1.8
345,015 + 0.3
345,034 - -1.1