Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1835

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1834: 10202 - Hypothetical Protein, at 323054 to 324268 10202 mRNA_1835: 10203 - K10601 SYVN1, HRD1 E3 ubiquitin-protein ligase synoviolin, at 324649 to 327501 10203

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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323,983 - 10202 mRNA_1834 0.76 0.6
324,373 - -0.9
324,383 - 0.2
324,813 + -0.2
325,115 - 10203 mRNA_1835 0.16 -1.9
325,846 - 10203 mRNA_1835 0.42 -1.7
326,323 - 10203 mRNA_1835 0.59 -1.7
326,473 + 10203 mRNA_1835 0.64 -0.7
326,608 + 10203 mRNA_1835 0.69 -0.8
326,877 + 10203 mRNA_1835 0.78 -1.3
326,913 + 10203 mRNA_1835 0.79 1.3
327,059 + 10203 mRNA_1835 0.84 -0.0
327,335 - -0.9
327,347 + -0.6
327,356 + -1.4
327,358 + -3.2
327,611 + 1.2
327,629 + -0.8
327,650 - 0.6
327,651 + 1.1
327,782 - -0.3
327,813 + 0.9
327,817 + -0.0
328,027 - 1.0
328,122 + 0.7
328,228 - 0.1
328,263 + -1.6