Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1680

Experiments: YNB Glucose 75mM Methionine

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1679: 10047 - BLAST cyclin-like F-box domain containing protein [Rhod..., at 873109 to 875707 10047 mRNA_1680: 10048 - BLAST cyclin-like F-box domain containing protein [Rhod..., at 876384 to 878826 10048 mRNA_1681: 10049 - K03126 TAF12 transcription initiation factor TFIID subunit 12, at 879318 to 879933 10049

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
remove
875,388 - 10047 mRNA_1679 0.88 -0.6
875,470 + 1.2
875,488 + -0.8
875,722 - 1.5
875,731 + 0.1
875,901 - -1.7
875,939 - 0.3
876,033 - 0.1
876,159 - 0.5
876,375 - 0.7
876,383 + 1.2
876,601 - -0.4
876,643 - 10048 mRNA_1680 0.11 0.5
876,861 - 10048 mRNA_1680 0.20 0.9
877,048 - 10048 mRNA_1680 0.27 -1.5
877,139 + 10048 mRNA_1680 0.31 -0.6
877,365 - 10048 mRNA_1680 0.40 1.0
877,378 - 10048 mRNA_1680 0.41 1.0
877,622 - 10048 mRNA_1680 0.51 0.6
877,629 + 10048 mRNA_1680 0.51 -1.1
877,647 + 10048 mRNA_1680 0.52 -0.1
877,704 + 10048 mRNA_1680 0.54 1.9
877,799 - 10048 mRNA_1680 0.58 1.6
878,210 - 10048 mRNA_1680 0.75 1.5
878,533 - 10048 mRNA_1680 0.88 0.2
878,565 + 10048 mRNA_1680 0.89 -1.9
878,565 + 10048 mRNA_1680 0.89 -0.4
878,588 - -1.0
878,742 + -0.8
878,857 - -1.1
879,009 + -0.0
879,132 + -0.8
879,135 + 0.1
879,274 + 0.1