Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1634

Experiments: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1633: 10001 - HMMPfam-Major Facilitator Superfamily-PF07690,ProSiteProfiles-Major facilitator superfamily (MFS) profile.-PS50850,SUPERFAMILY--SSF103473, at 762446 to 764135 10001 mRNA_1634: 10002 - HMMPfam-alpha/beta hydrolase fold-PF07859,ProSitePatterns-Lipolytic enzymes "G-D-X-G" family, putative serine active site.-PS01174,SUPERFAMILY--SSF53474, at 764315 to 766210 10002

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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763,319 - 10001 mRNA_1633 0.52 -0.1
763,686 - 10001 mRNA_1633 0.73 0.1
763,697 - 10001 mRNA_1633 0.74 1.2
764,029 + 0.3
764,245 - 1.3
764,261 + 1.4
764,263 - -2.3
764,263 - 0.1
764,269 - -0.2
764,430 - 0.2
764,821 - 10002 mRNA_1634 0.27 0.8
765,148 - 10002 mRNA_1634 0.44 -0.3
765,427 - 10002 mRNA_1634 0.59 -0.3
765,517 - 10002 mRNA_1634 0.63 -1.3
765,529 - 10002 mRNA_1634 0.64 0.2
765,547 - 10002 mRNA_1634 0.65 2.2
765,652 + 10002 mRNA_1634 0.71 -0.8
765,710 + 10002 mRNA_1634 0.74 -1.2
765,863 + 10002 mRNA_1634 0.82 -1.0
766,005 - 10002 mRNA_1634 0.89 1.0
766,210 + 0.9
766,315 + 1.9
766,328 - 1.0
766,600 + 0.0
766,603 + 0.3
766,908 - 0.8
766,909 + 1.2
766,909 + 0.8
767,051 + 0.6
767,053 - 0.8
767,178 - -1.2
767,189 - 1.1