Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1551

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1551: 9919 - HMMPfam-Ferritin-like domain-PF13668,SUPERFAMILY--SSF47240, at 571932 to 573047 9919 mRNA_1552: 9920 - K03115 CSNK2B casein kinase II subunit beta, at 573433 to 575580 9920

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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570,946 + 1.0
571,044 - 0.3
571,191 - 1.3
571,212 + 1.9
571,239 + 1.8
571,343 - 0.0
571,468 + 1.1
571,491 - 1.2
571,510 - 1.4
571,516 + 0.5
571,525 - 0.2
571,536 + -1.3
571,561 - 0.6
571,591 + 0.4
571,619 - 0.0
571,643 - 1.4
571,646 - 1.1
571,655 + 0.4
571,674 + 1.8
571,676 + 0.8
571,711 + 0.2
571,809 - -0.1
571,816 - 0.8
571,818 - -1.5
571,956 + -0.2
571,960 - -0.4
572,105 + 9919 mRNA_1551 0.16 -0.3
572,306 - 9919 mRNA_1551 0.34 0.4
572,346 - 9919 mRNA_1551 0.37 0.4
572,547 + 9919 mRNA_1551 0.55 0.2
572,564 - 9919 mRNA_1551 0.57 -0.5
572,685 + 9919 mRNA_1551 0.67 0.7
572,882 - 9919 mRNA_1551 0.85 -0.4
572,899 + 9919 mRNA_1551 0.87 -0.4
573,586 + -1.4
573,648 + 9920 mRNA_1552 0.10 -2.6
573,680 - 9920 mRNA_1552 0.11 0.4
573,988 - 9920 mRNA_1552 0.26 -0.3