Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1279

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1278: 9646 - KOG1414 Transcriptional activator FOSB/c-Fos and related bZIP transcription factors, at 819504 to 821830 9646 mRNA_1279: 9647 - BLAST family 16 carbohydrate esterase [Melampsora laric..., at 822626 to 824265 9647

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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821,706 - 0.9
821,717 - -0.1
821,730 + 0.4
821,744 + 0.1
821,748 + 1.2
821,752 - 0.2
821,755 + 0.9
821,764 + 0.2
821,835 + 0.2
821,887 + 1.0
821,911 + 0.4
821,919 + 0.7
821,919 + -0.3
821,921 + -0.1
821,922 - 2.3
821,923 - 0.8
821,923 + -0.3
821,924 + 0.2
821,927 + 0.8
821,928 + 0.6
821,929 - 0.8
821,931 + 0.4
821,939 - -1.7
821,940 - -0.9
821,941 - -1.3
821,941 + 1.2
821,965 + -0.1
821,970 - -2.9
821,975 - 1.7
821,983 - 0.6
821,996 - 0.1
822,000 - 0.7
822,004 - -0.3
822,005 - 0.8
822,091 - 0.2
822,179 - -0.7
822,180 + 0.8
822,189 - -1.1
822,208 - 0.2
822,214 - 1.7
822,214 - -0.1
822,231 - 0.1
822,235 - 0.1
822,242 + -3.3
822,242 + -1.4
822,249 + 0.6
822,250 + 0.5
822,257 - -0.2
822,259 + -1.7
822,262 + 0.8
822,266 - 0.3
822,375 + 0.8
822,377 + 4.4
823,107 - 9647 mRNA_1279 0.29 1.3
823,108 + 9647 mRNA_1279 0.29 1.7
823,119 + 9647 mRNA_1279 0.30 0.2
823,440 - 9647 mRNA_1279 0.50 0.2
823,448 + 9647 mRNA_1279 0.50 0.1
823,697 - 9647 mRNA_1279 0.65 0.1
823,735 + 9647 mRNA_1279 0.68 0.1
824,015 + 9647 mRNA_1279 0.85 1.0
824,386 - 3.2
824,792 - -2.5
824,796 + -0.2
824,800 + 2.1
824,821 + 0.5
824,821 + 1.3
824,866 + 0.2
824,874 - 0.5
824,874 + 1.8
824,894 + -0.9
825,013 + 0.3
825,046 - 0.6
825,053 + 0.6
825,054 - 0.1
825,095 - -0.7
825,116 - 0.3
825,141 + 1.7
825,141 + -1.3
825,178 - -0.4
825,184 - 0.2
825,190 + 0.6
825,191 - 0.7
825,193 - -0.3
825,198 + -0.1
825,200 - -0.8
825,206 + 0.0
825,211 + 0.6
825,211 + 2.3
825,224 - 0.8
825,241 - -1.1
825,243 + -0.4
825,244 - -0.3
825,245 - 0.1