Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1174

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1173: 9541 - Hypothetical Protein, at 574105 to 575221 9541 mRNA_1174: 9542 - K15190 MEPCE, BCDIN3 7SK snRNA methylphosphate capping enzyme, at 575723 to 577057 9542 mRNA_1175: 9543 - Hypothetical Protein, at 577542 to 578636 9543

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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574,816 + 9541 mRNA_1173 0.64 -0.4
574,822 + 9541 mRNA_1173 0.64 0.1
574,822 + 9541 mRNA_1173 0.64 -1.0
574,834 + 9541 mRNA_1173 0.65 -1.1
574,854 - 9541 mRNA_1173 0.67 -2.2
574,956 - 9541 mRNA_1173 0.76 0.5
575,087 + 9541 mRNA_1173 0.88 0.3
575,153 - -0.8
575,203 + 1.6
575,221 + -1.1
575,245 + 0.9
575,388 + -1.1
575,403 + -1.1
575,546 + 0.1
575,673 + 0.1
575,685 - 1.1
575,685 - -0.3
575,688 + 0.9
575,805 - 0.9
575,824 + -1.0
575,967 + 9542 mRNA_1174 0.18 0.2
575,973 - 9542 mRNA_1174 0.19 -1.8
576,172 - 9542 mRNA_1174 0.34 -0.8
576,184 + 9542 mRNA_1174 0.35 0.3
576,269 - 9542 mRNA_1174 0.41 0.2
576,424 - 9542 mRNA_1174 0.53 1.5
576,542 - 9542 mRNA_1174 0.61 0.5
576,548 + 9542 mRNA_1174 0.62 -0.9
576,571 + 9542 mRNA_1174 0.64 1.0
576,600 - 9542 mRNA_1174 0.66 1.1
576,649 - 9542 mRNA_1174 0.69 -1.9
576,688 - 9542 mRNA_1174 0.72 -0.5
576,742 - 9542 mRNA_1174 0.76 -0.5
576,745 - 9542 mRNA_1174 0.77 0.3
576,857 + 9542 mRNA_1174 0.85 -1.8
576,979 + 0.6
576,984 + -0.7
577,026 + 0.1
577,118 - -1.7
577,139 - 0.8
577,610 + -1.0
577,639 + 0.5
577,824 - 9543 mRNA_1175 0.26 -0.6
577,854 + 9543 mRNA_1175 0.28 -2.8
577,881 - 9543 mRNA_1175 0.31 0.2
577,991 + 9543 mRNA_1175 0.41 1.6