Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_957

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_956: 9324 - KOG2466 Uridine permease/thiamine transporter/allantoin transport, at 64037 to 66119 9324 mRNA_957: 9325 - K07160 K07160 UPF0271 protein, at 67059 to 67959 9325 mRNA_958: 9326 - K14541 DUR1 urea carboxylase / allophanate hydrolase, at 68505 to 72950 9326

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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66,238 + 0.0
66,268 + 2.3
66,282 - 1.4
66,323 + 0.4
66,333 - 0.7
66,359 - -1.0
66,367 + 0.5
66,375 - 0.1
66,382 + 0.8
66,418 - -1.0
66,676 - 1.2
66,676 + 2.1
66,693 + -0.0
66,701 - -0.9
66,812 + -2.1
66,836 + -0.3
66,842 - -0.1
66,891 + 1.4
66,892 - -1.4
66,962 - -0.3
66,972 + -1.4
67,008 + 3.6
67,126 + 0.8
67,126 + -1.2
67,135 + 1.5
67,269 - 9325 mRNA_957 0.23 -0.9
67,390 - 9325 mRNA_957 0.37 -0.1
67,540 - 9325 mRNA_957 0.53 1.0
67,541 + 9325 mRNA_957 0.53 1.5
67,567 - 9325 mRNA_957 0.56 -0.5
67,590 + 9325 mRNA_957 0.59 -0.7
67,706 + 9325 mRNA_957 0.72 -0.7
67,709 - 9325 mRNA_957 0.72 0.6
67,719 - 9325 mRNA_957 0.73 -0.1
67,751 + 9325 mRNA_957 0.77 -0.6
68,023 - 1.8
68,047 + 0.4
68,132 + 0.5
68,141 - 0.0
68,156 + 0.4
68,166 - 2.4
68,167 - 0.3
68,189 - 0.5
68,340 - 0.8
68,448 - 0.2
68,470 - 0.0
68,476 + 0.9
68,493 + 0.4
68,624 - 0.2
68,680 - 0.7
68,727 - -1.5
68,784 + -1.0
68,882 + 0.0
68,917 + -0.6
68,930 + -0.7