Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_930

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_930: 9298 - K00861 RFK, FMN1 riboflavin kinase, at 359 to 1600 9298 mRNA_931: 9299 - K14794 RRP12 ribosomal RNA-processing protein 12, at 1838 to 6021 9299

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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1 + -0.1
1 + -0.7
1 + 0.7
1 + 1.0
1 + -0.1
2 + 0.5
2 + -0.7
5 + 0.2
18 + -0.1
30 + 1.2
37 + -0.4
37 + 2.1
41 + 0.5
42 + 0.4
44 + 0.4
49 + 0.5
49 + 2.1
50 + 0.2
54 + 0.9
58 - 1.5
60 - 0.3
60 + 0.8
60 - -0.7
61 - -0.5
61 + -1.6
63 + 1.0
63 + -0.1
63 + -0.4
63 + 2.3
63 + 1.3
63 + 0.0
64 + 0.8
66 - 0.3
66 + -1.8
70 + 0.5
70 + -0.4
70 - 0.5
71 + -1.8
73 + 0.5
75 - -1.6
77 - 0.1
78 + 1.2
78 - -1.5
78 + -1.3
78 + -0.1
78 + -0.3
78 + 0.3
78 + 0.6
78 + 0.2
78 + -0.7
79 + -0.5
81 - 1.4
81 - 3.0
82 + 1.2
85 + 1.3
104 + -0.2
126 + -0.2
126 + -2.5
128 - 1.0
135 + 0.8
142 + 0.2
150 + 1.7
154 + -0.8
157 + 1.4
171 - -1.0
171 + -0.1
172 + 1.4
172 + 0.8
175 - 0.2
176 - 1.0
177 - 1.0
177 - 0.5
191 - 0.3
192 + 1.2
192 + -0.2
192 + 0.4
193 + -1.8
193 + -0.6
193 + -0.0
198 - -1.1
218 + 0.1
225 + -0.5
235 + 1.9
242 + 2.0
263 - -0.5
293 + 0.6
303 + -0.2
333 - -0.6
339 - -2.1
348 + 1.0
349 + -0.8
377 - -0.2
381 - -1.2
469 + -2.7
487 - 9298 mRNA_930 0.10 0.2
722 + 9298 mRNA_930 0.29 -1.2
1,641 - -0.8
1,656 - -1.0
1,768 - 0.3
1,778 - 0.3
1,794 + 0.2