Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_518

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_517: 8885 - K07508 ACAA2 acetyl-CoA acyltransferase 2, at 1229501 to 1231364 8885 mRNA_518: 8886 - HMMPfam-Major Facilitator Superfamily-PF07690,SUPERFAMILY--SSF103473, at 1231693 to 1233306 8886

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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1,230,931 - 8885 mRNA_517 0.77 -0.3
1,231,092 + 8885 mRNA_517 0.85 -1.0
1,231,229 + 0.8
1,231,243 + -0.6
1,231,344 - -0.1
1,231,355 - 0.9
1,231,362 - 0.7
1,231,385 - 0.9
1,231,387 - -0.7
1,231,505 - 0.6
1,231,512 + 0.4
1,231,514 + 0.0
1,231,514 - 0.0
1,231,516 + 0.0
1,231,517 - -1.9
1,231,527 - 0.2
1,231,528 - 0.2
1,231,543 + 0.3
1,231,552 + -0.4
1,231,981 - 8886 mRNA_518 0.18 1.9
1,232,126 + 8886 mRNA_518 0.27 1.0
1,232,590 + 8886 mRNA_518 0.56 -1.2
1,232,858 + 8886 mRNA_518 0.72 -0.1
1,232,995 - 8886 mRNA_518 0.81 -0.2
1,233,005 + 8886 mRNA_518 0.81 -0.3
1,233,032 + 8886 mRNA_518 0.83 0.7
1,233,155 - 0.6
1,233,308 + 0.2
1,233,313 - 0.2
1,233,614 - 0.1
1,233,709 - 0.3
1,234,028 - 0.8