Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_478

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_477: 8845 - K10256 FAD2 omega-6 fatty acid desaturase / acyl-lipid omega-6 desaturase (Delta-12 desaturase), at 1108768 to 1110470 8845 mRNA_478: 8846 - HMMPfam-Tetratricopeptide repeat-PF07719,HMMPfam-TPR repeat-PF13414,ProSiteProfiles-TPR repeat region circular profile.-PS50293,SMART-Tetratricopeptide repeats-SM00028,SUPERFAMILY--SSF48452, at 1111046 to 1113487 8846 mRNA_479: 8847 - K17302 COPB2, SEC27 coatomer subunit beta', at 1114132 to 1117214 8847

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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1,110,524 + -0.8
1,110,541 + 1.0
1,110,557 + 0.7
1,110,665 + -0.0
1,110,675 + 0.8
1,110,685 + 0.4
1,110,689 - -1.0
1,110,693 + 0.5
1,110,695 - 2.5
1,110,695 - 1.0
1,110,696 + 0.3
1,110,700 + -0.5
1,110,701 + 1.0
1,110,702 - -1.4
1,110,707 - 0.2
1,110,707 - 2.0
1,110,709 - 0.1
1,110,711 - -1.5
1,110,714 - 0.2
1,110,728 + -0.0
1,110,734 + 0.7
1,110,739 + -0.1
1,110,739 + 0.7
1,110,739 + 0.1
1,110,739 + 0.3
1,110,740 - 0.3
1,110,740 - -0.1
1,110,814 - -0.0
1,110,815 - 1.6
1,110,818 - 1.3
1,110,827 - -1.6
1,110,833 + -0.1
1,110,837 - 0.1
1,110,839 - 1.1
1,110,839 - 0.1
1,110,863 + 0.5
1,110,985 + 1.6
1,110,992 - 0.4
1,111,007 - 0.1
1,111,012 + -0.2
1,111,042 + 1.4
1,111,102 - 1.4
1,111,116 - -1.4
1,112,161 - 8846 mRNA_478 0.46 0.3
1,112,167 - 8846 mRNA_478 0.46 -0.5
1,112,553 + 8846 mRNA_478 0.62 2.9
1,112,571 + 8846 mRNA_478 0.62 0.6
1,112,594 - 8846 mRNA_478 0.63 0.2
1,112,747 + 8846 mRNA_478 0.70 1.6
1,113,142 - 8846 mRNA_478 0.86 -0.0
1,113,285 - -1.0
1,113,450 - -1.8
1,113,612 - -0.1
1,113,626 - 0.1
1,113,737 - 0.4
1,113,742 - 0.2
1,113,864 - -0.4
1,114,047 + 0.4
1,114,074 - -0.6
1,114,359 - 0.9