Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8464

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8463: 16831 - Hypothetical Protein, at 1293991 to 1295181 16831 mRNA_8464: 16832 - Hypothetical Protein, at 1295611 to 1296555 16832 mRNA_8465: 16833 - K00293 LYS9 saccharopine dehydrogenase (NADP+, L-glutamate forming), at 1297471 to 1300237 16833

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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1,294,634 + 16831 mRNA_8463 0.54 0.7
1,294,645 - 16831 mRNA_8463 0.55 0.9
1,294,741 - 16831 mRNA_8463 0.63 0.5
1,294,795 + 16831 mRNA_8463 0.68 0.6
1,294,937 - 16831 mRNA_8463 0.79 -0.9
1,294,959 - 16831 mRNA_8463 0.81 -0.3
1,295,168 - 0.8
1,295,339 + 0.6
1,295,360 - 0.5
1,295,366 + -0.2
1,295,393 + 2.5
1,295,395 + 0.8
1,295,401 + -0.2
1,295,403 + 1.5
1,295,403 - 0.5
1,295,427 + 1.9
1,295,507 - 0.2
1,295,515 + 0.3
1,295,516 + -0.7
1,295,527 - 0.4
1,295,536 - 0.4
1,295,536 + 1.6
1,295,538 - 0.7
1,295,538 - 1.0
1,295,539 + -2.5
1,295,539 + -0.2
1,295,541 + -0.2
1,295,543 + 1.5
1,295,543 - 1.8
1,295,544 + 0.5
1,295,545 + 0.1
1,295,550 + 1.0
1,295,554 + 0.3
1,295,554 + -0.6
1,295,559 + 0.6
1,295,559 + 0.8
1,295,559 + 0.7
1,295,563 + 0.8
1,295,571 + 0.4
1,295,580 - -0.9
1,295,582 - 0.8
1,295,589 + 1.2
1,295,591 - 1.0
1,295,599 - 2.1
1,295,633 - 0.9
1,295,648 + -0.3
1,295,651 + 1.1
1,295,654 - -0.0
1,295,662 - -0.1
1,295,662 - -0.2
1,295,663 - 0.6
1,295,665 - 0.5
1,295,666 + -1.2
1,295,669 + 0.7
1,295,674 - 0.1
1,295,680 - 0.4
1,295,681 - 0.4
1,295,681 - 0.5
1,295,687 - -0.6
1,295,691 + 0.0
1,295,691 + -0.4
1,295,694 - 0.2
1,295,695 - -0.1
1,295,699 + 0.5
1,295,704 + -0.1
1,295,705 + -0.3
1,295,735 + 16832 mRNA_8464 0.13 1.3
1,295,800 - 16832 mRNA_8464 0.20 -0.3
1,295,815 - 16832 mRNA_8464 0.22 -1.0
1,295,823 - 16832 mRNA_8464 0.22 -1.4
1,295,831 + 16832 mRNA_8464 0.23 1.0
1,295,840 - 16832 mRNA_8464 0.24 1.8
1,295,857 - 16832 mRNA_8464 0.26 0.0
1,295,863 - 16832 mRNA_8464 0.27 0.6
1,295,869 - 16832 mRNA_8464 0.27 0.9
1,295,903 - 16832 mRNA_8464 0.31 0.8
1,295,909 - 16832 mRNA_8464 0.32 0.4
1,295,926 - 16832 mRNA_8464 0.33 0.7
1,295,930 - 16832 mRNA_8464 0.34 2.1
1,295,953 - 16832 mRNA_8464 0.36 0.4
1,295,956 + 16832 mRNA_8464 0.37 0.2
1,295,956 + 16832 mRNA_8464 0.37 0.5
1,295,958 - 16832 mRNA_8464 0.37 1.1
1,295,967 + 16832 mRNA_8464 0.38 1.7
1,295,972 + 16832 mRNA_8464 0.38 1.0
1,295,974 + 16832 mRNA_8464 0.38 0.1
1,295,988 + 16832 mRNA_8464 0.40 -0.6
1,295,988 + 16832 mRNA_8464 0.40 0.7
1,296,006 + 16832 mRNA_8464 0.42 0.1
1,296,011 - 16832 mRNA_8464 0.42 0.8
1,296,011 - 16832 mRNA_8464 0.42 1.5
1,296,024 + 16832 mRNA_8464 0.44 0.6
1,296,027 + 16832 mRNA_8464 0.44 0.0
1,296,028 - 16832 mRNA_8464 0.44 -0.4
1,296,032 + 16832 mRNA_8464 0.45 -1.1
1,296,034 - 16832 mRNA_8464 0.45 0.6
1,296,035 + 16832 mRNA_8464 0.45 2.1
1,296,037 + 16832 mRNA_8464 0.45 0.1
1,296,038 + 16832 mRNA_8464 0.45 0.3
1,296,042 - 16832 mRNA_8464 0.46 -0.1
1,296,090 + 16832 mRNA_8464 0.51 0.3
1,296,106 - 16832 mRNA_8464 0.52 -0.7
1,296,109 - 16832 mRNA_8464 0.53 -1.1
1,296,119 + 16832 mRNA_8464 0.54 -0.1
1,296,121 - 16832 mRNA_8464 0.54 -0.7
1,296,125 + 16832 mRNA_8464 0.54 1.1
1,296,128 + 16832 mRNA_8464 0.55 0.8
1,296,138 - 16832 mRNA_8464 0.56 0.5
1,296,138 - 16832 mRNA_8464 0.56 0.5
1,296,141 - 16832 mRNA_8464 0.56 -2.0
1,296,146 + 16832 mRNA_8464 0.57 -1.8
1,296,158 + 16832 mRNA_8464 0.58 -0.8
1,296,167 + 16832 mRNA_8464 0.59 0.9
1,296,168 + 16832 mRNA_8464 0.59 -0.1
1,296,185 - 16832 mRNA_8464 0.61 -0.0
1,296,197 - 16832 mRNA_8464 0.62 0.6
1,296,202 - 16832 mRNA_8464 0.63 -1.8
1,296,216 - 16832 mRNA_8464 0.64 1.8
1,296,242 - 16832 mRNA_8464 0.67 0.3
1,296,246 - 16832 mRNA_8464 0.67 -0.4
1,296,250 + 16832 mRNA_8464 0.68 0.8
1,296,265 + 16832 mRNA_8464 0.69 0.5
1,296,276 - 16832 mRNA_8464 0.70 -0.7
1,296,291 - 16832 mRNA_8464 0.72 -0.5
1,296,299 - 16832 mRNA_8464 0.73 1.1
1,296,332 - 16832 mRNA_8464 0.76 0.8
1,296,332 + 16832 mRNA_8464 0.76 -0.5
1,296,335 - 16832 mRNA_8464 0.77 -0.1
1,296,365 - 16832 mRNA_8464 0.80 -0.6
1,296,379 + 16832 mRNA_8464 0.81 -0.5
1,296,390 + 16832 mRNA_8464 0.82 0.6
1,296,413 + 16832 mRNA_8464 0.85 0.8
1,296,435 - 16832 mRNA_8464 0.87 -0.2
1,296,457 - 16832 mRNA_8464 0.90 2.1
1,296,468 + 0.6
1,296,470 + 1.6
1,296,479 - -0.6
1,296,481 - -0.9
1,296,549 + 2.6
1,296,561 + 0.1
1,296,577 + -1.5
1,296,587 + 2.8
1,296,589 + 1.3
1,296,608 - 0.4
1,296,619 + 0.2
1,296,640 - 0.3
1,296,650 + -1.2
1,296,692 + 1.1
1,296,763 + -1.8
1,296,767 - 2.4
1,296,767 - 0.4
1,296,785 - 0.1
1,296,785 - 2.3
1,296,789 - 0.1
1,296,807 + 1.0
1,296,808 + -2.4
1,296,811 + 1.3
1,296,813 - 0.0
1,296,826 + -1.3
1,296,879 + 1.1
1,296,894 + -1.4
1,296,930 + -0.1
1,297,029 - -0.6
1,297,033 + 2.7
1,297,080 + 2.6
1,297,109 - 0.2
1,297,180 + -1.0
1,297,183 - 0.0