Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8444

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8442: 16810 - K19852 KIN1_2 serine/threonine protein kinase KIN1/2, at 1239780 to 1244729 16810 mRNA_8443: 16811 - Hypothetical Protein, at 1244960 to 1245436 16811 mRNA_8444: 16812 - HMMPfam-HPP family-PF04982, at 1245656 to 1246720 16812 mRNA_8445: 16813 - KOG0691 Molecular chaperone (DnaJ superfamily), at 1247628 to 1249851 16813

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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1,244,700 - 0.3
1,245,045 - 16811 mRNA_8443 0.18 0.6
1,245,494 + 1.8
1,245,574 + 0.9
1,245,902 - 16812 mRNA_8444 0.23 -2.1
1,246,207 + 16812 mRNA_8444 0.52 -1.2
1,246,365 + 16812 mRNA_8444 0.67 -0.2
1,246,390 - 16812 mRNA_8444 0.69 -2.9
1,246,398 + 16812 mRNA_8444 0.70 -1.8
1,246,451 + 16812 mRNA_8444 0.75 -0.7
1,246,460 - 16812 mRNA_8444 0.75 -1.5
1,246,481 + 16812 mRNA_8444 0.77 -0.7
1,246,493 - 16812 mRNA_8444 0.79 0.2
1,246,511 + 16812 mRNA_8444 0.80 -1.6
1,246,625 + 1.1
1,246,645 - -1.4
1,246,652 + 0.4
1,246,654 + 1.0
1,246,792 + -0.8
1,246,792 + 0.1
1,246,810 - 0.5
1,246,833 + -0.5
1,246,840 + -0.2
1,246,841 + -1.2
1,246,849 + 0.7
1,246,861 + -0.8
1,246,867 - 1.8
1,246,953 - -0.0
1,247,005 + -0.2
1,247,267 + 2.3
1,247,281 - -0.2
1,247,443 - 0.5
1,247,564 + -0.9
1,247,573 + 0.1
1,247,576 + 0.9
1,247,578 + 0.9
1,247,581 - 0.1
1,247,583 - 1.7
1,247,591 - 0.0
1,247,598 - -0.9
1,247,617 + 0.6
1,247,635 + 0.6
1,247,692 + 0.0
1,247,696 + 1.6
1,247,704 - -2.0
1,247,717 - -0.5
1,247,719 + -0.9