Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8179

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8179: 16547 - K20705 DNMBP, ARHGEF36, TUBA dynamin-binding protein, at 608885 to 612908 16547 mRNA_8180: 16548 - K13127 RNF113A, CWC24 RING finger protein 113A, at 613134 to 614430 16548

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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607,911 - 1.8
607,943 + -0.4
607,947 - -0.3
607,947 + 1.1
607,956 - 1.4
607,957 + 3.0
607,968 - -1.5
607,969 - 1.5
607,976 + 1.4
607,985 - 0.3
608,012 - 1.1
608,026 - -0.4
608,034 - -0.5
608,069 + 0.4
608,071 - 0.2
608,073 - 0.7
608,081 + 0.5
608,082 + -2.5
608,083 + -1.5
608,086 - -0.1
608,086 + 0.5
608,087 - -0.1
608,089 + 1.4
608,091 - -0.8
608,096 + -0.1
608,099 - 0.3
608,101 + 1.0
608,103 + 0.5
608,112 - 0.0
608,112 - 0.4
608,117 + -0.1
608,120 + -0.2
608,128 - -0.4
608,145 + 0.4
608,158 + -0.4
608,158 + 0.7
608,161 - 0.2
608,161 + -0.5
608,162 + -0.7
608,182 + 0.5
608,182 + -1.2
608,186 + 0.1
608,186 + 1.6
608,187 - 0.4
608,191 - 0.1
608,193 - 0.2
608,197 - -0.7
608,198 + 0.7
608,202 + 0.8
608,208 - -1.0
608,209 + -0.7
608,209 + 0.7
608,209 + 0.4
608,219 - 1.0
608,222 + -1.4
608,223 + -0.8
608,229 - -0.5
608,231 + 0.1
608,239 - 1.2
608,244 + 0.4
608,245 - 2.6
608,246 + 0.5
608,246 - -0.1
608,246 + 0.6
608,247 + -0.2
608,251 - 0.4
608,256 + -2.1
608,257 - 0.6
608,257 - -0.5
608,262 - 0.0
608,263 + -0.6
608,264 - -0.1
608,266 + 1.5
608,268 + 0.7
608,268 + 1.0
608,271 - -0.9
608,275 + -0.6
608,284 + 0.1
608,287 + 4.4
608,294 + 0.6
608,294 + -1.0
608,317 + 1.1
608,333 - 0.4
608,335 + -0.1
608,345 - 0.5
608,349 - -0.3
608,353 - -0.6
608,359 - -0.4
608,366 - 0.8
608,371 - 0.3
608,375 - 1.1
608,378 + 0.7
608,381 - 1.5
608,382 - 0.6
608,382 - -1.5
608,391 + -0.1
608,392 + 0.4
608,400 + -2.2
608,416 - 1.1
608,548 - 0.4
608,678 - 0.7
608,699 - -0.6
608,713 + 0.6
608,713 + 0.5
608,717 - 2.0
608,721 + 1.6
608,731 - 2.2
608,835 - 0.2
608,840 - 0.4
609,042 + 0.7
609,107 + 0.1
609,114 - 0.3
609,126 + -0.3
609,143 + -0.8
609,150 + 0.9
609,270 - 0.4
609,277 + -1.0
609,284 + -0.3
609,848 - 16547 mRNA_8179 0.24 1.3
610,168 + 16547 mRNA_8179 0.32 0.8
610,336 - 16547 mRNA_8179 0.36 1.2
611,053 + 16547 mRNA_8179 0.54 0.1
611,075 - 16547 mRNA_8179 0.54 -0.2
611,083 + 16547 mRNA_8179 0.55 0.9
611,175 + 16547 mRNA_8179 0.57 -1.3
611,188 - 16547 mRNA_8179 0.57 -1.1
611,729 + 16547 mRNA_8179 0.71 0.6
611,764 + 16547 mRNA_8179 0.72 -2.0
611,944 + 16547 mRNA_8179 0.76 0.0
612,061 + 16547 mRNA_8179 0.79 0.1
612,942 - -0.1
613,077 + -1.5
613,079 - 0.7