Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8002

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8001: 16369 - K01092 E3.1.3.25, IMPA, suhB myo-inositol-1(or 4)-monophosphatase, at 183994 to 185593 16369 mRNA_8002: 16370 - KOG0132 RNA polymerase II C-terminal domain-binding protein RA4, contains RPR and RRM domains, at 186103 to 188392 16370

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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185,395 + 16369 mRNA_8001 0.88 0.9
185,425 - 16369 mRNA_8001 0.89 0.2
185,544 + 1.0
185,640 - 0.8
185,687 + 0.2
185,689 - 0.9
185,696 + 1.9
185,754 + 0.9
185,775 - -0.4
185,786 + -1.4
185,845 - 0.3
185,881 - 0.7
185,918 + 0.9
185,926 + 0.5
185,933 + 0.2
185,941 + -1.6
185,953 + -0.1
186,134 - 1.8
186,181 + 0.2
186,284 - 0.5
186,332 - 16370 mRNA_8002 0.10 0.3
186,396 - 16370 mRNA_8002 0.13 1.1
186,423 + 16370 mRNA_8002 0.14 -1.0
187,162 + 16370 mRNA_8002 0.46 -1.7
187,294 - 16370 mRNA_8002 0.52 -0.5
187,449 + 16370 mRNA_8002 0.59 0.1
187,454 - 16370 mRNA_8002 0.59 -0.4
187,467 - 16370 mRNA_8002 0.60 0.5
189,362 + -0.2