Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7875

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7874: 16242 - K02202 CDK7 cyclin-dependent kinase 7, at 1274246 to 1275705 16242 mRNA_7875: 16243 - HMMPfam-Protein of unknown function (DUF4246)-PF14033, at 1276144 to 1278283 16243 mRNA_7876: 16244 - HMMPfam-Protein of unknown function (DUF4246)-PF14033, at 1278407 to 1280463 16244

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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1,275,549 - 16242 mRNA_7874 0.89 -0.2
1,275,796 - -0.2
1,275,839 + 0.2
1,275,887 + 1.4
1,275,888 + 0.9
1,275,903 - 0.2
1,275,926 + 1.7
1,275,934 + 0.4
1,275,941 + 0.1
1,275,944 - -0.4
1,275,949 + 0.2
1,275,952 - 0.5
1,275,952 - 1.1
1,275,967 + 0.6
1,275,975 + 0.2
1,275,977 - 1.5
1,276,030 - -0.1
1,276,042 + 1.6
1,276,043 + 1.2
1,276,053 - 0.3
1,276,066 + 1.2
1,276,073 - 1.2
1,276,076 - -0.9
1,276,078 - 0.0
1,276,083 + 1.5
1,276,088 - 0.5
1,276,106 - 1.1
1,276,109 + 0.5
1,276,119 + 0.2
1,276,137 - 0.3
1,276,242 - -0.0
1,276,249 + -0.7
1,276,281 - -0.8
1,276,363 + 16243 mRNA_7875 0.10 0.8
1,276,382 + 16243 mRNA_7875 0.11 0.7
1,276,528 - 16243 mRNA_7875 0.18 0.3
1,276,587 + 16243 mRNA_7875 0.21 -0.7
1,276,729 + 16243 mRNA_7875 0.27 0.1
1,276,959 + 16243 mRNA_7875 0.38 -0.7
1,277,110 - 16243 mRNA_7875 0.45 -1.8
1,277,126 - 16243 mRNA_7875 0.46 0.5
1,277,146 + 16243 mRNA_7875 0.47 -0.6
1,277,437 - 16243 mRNA_7875 0.60 -1.0
1,277,593 - 16243 mRNA_7875 0.68 1.9
1,277,626 + 16243 mRNA_7875 0.69 0.3
1,277,720 - 16243 mRNA_7875 0.74 -0.2
1,277,831 - 16243 mRNA_7875 0.79 -0.4
1,277,860 - 16243 mRNA_7875 0.80 -0.8
1,277,863 - 16243 mRNA_7875 0.80 0.6
1,277,870 + 16243 mRNA_7875 0.81 -0.2
1,278,047 + 16243 mRNA_7875 0.89 1.0
1,278,292 - 1.4
1,278,403 + 0.8
1,278,482 - 2.3
1,278,491 + -1.0
1,278,779 + 16244 mRNA_7876 0.18 2.0
1,279,010 - 16244 mRNA_7876 0.29 0.2