Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7803

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7803: 16171 - K11855 USP36_42 ubiquitin carboxyl-terminal hydrolase 36/42, at 1108801 to 1111238 16171 mRNA_7804: 16172 - KOG1204 Predicted dehydrogenase, at 1111520 to 1112833 16172

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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1,107,808 + -0.5
1,107,829 - 1.5
1,107,830 + 0.1
1,107,833 - 0.2
1,107,844 + 0.9
1,107,851 + -1.2
1,107,853 - 0.7
1,107,873 - 0.6
1,107,983 - 1.6
1,108,033 - -0.0
1,108,044 - 1.9
1,108,059 - -0.8
1,108,153 - 0.4
1,108,168 - 0.8
1,108,169 + 1.1
1,108,169 + -0.6
1,108,176 - -0.2
1,108,177 - -0.0
1,108,179 - 0.7
1,108,187 - 1.2
1,108,190 + -0.9
1,108,190 + -0.7
1,108,207 - 1.3
1,108,211 - 0.2
1,108,212 - 1.5
1,108,236 - -0.0
1,108,236 - -0.2
1,108,237 + 0.2
1,108,247 - -1.0
1,108,259 + 0.9
1,108,261 - -0.2
1,108,262 + 0.2
1,108,674 - -0.0
1,108,829 + -0.7
1,109,148 + 16171 mRNA_7803 0.14 1.3
1,109,178 + 16171 mRNA_7803 0.15 0.5
1,110,119 - 16171 mRNA_7803 0.54 -0.3
1,111,009 - -1.1
1,111,319 - 0.4
1,111,456 - 2.6
1,111,456 - 0.1
1,111,465 - -0.1
1,111,474 - -0.7
1,111,487 - -0.3
1,111,625 - 0.8
1,111,629 - 2.0
1,111,633 + 0.0
1,111,640 + 2.1
1,111,766 - 16172 mRNA_7804 0.19 0.3
1,111,783 + 16172 mRNA_7804 0.20 0.6
1,111,898 - 16172 mRNA_7804 0.29 1.0
1,111,904 - 16172 mRNA_7804 0.29 -3.2
1,111,914 + 16172 mRNA_7804 0.30 0.2
1,112,049 - 16172 mRNA_7804 0.40 1.2