Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7488

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7488: 15856 - K00558 DNMT1, dcm DNA (cytosine-5)-methyltransferase 1, at 403840 to 407882 15856 mRNA_7489: 15857 - K12351 SMPD2 sphingomyelin phosphodiesterase 2, at 408031 to 409638 15857

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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403,436 - 1.8
403,525 - -0.1
403,590 + 1.2
404,314 + 15856 mRNA_7488 0.12 0.2
404,334 - 15856 mRNA_7488 0.12 0.2
404,471 - 15856 mRNA_7488 0.16 -0.4
404,495 - 15856 mRNA_7488 0.16 -1.4
404,635 - 15856 mRNA_7488 0.20 2.8
404,650 + 15856 mRNA_7488 0.20 1.9
404,724 + 15856 mRNA_7488 0.22 -0.3
405,356 + 15856 mRNA_7488 0.37 0.1
405,528 + 15856 mRNA_7488 0.42 1.0
405,805 - 15856 mRNA_7488 0.49 -0.6
405,953 - 15856 mRNA_7488 0.52 0.4
406,012 + 15856 mRNA_7488 0.54 0.0
406,140 - 15856 mRNA_7488 0.57 0.4
406,336 - 15856 mRNA_7488 0.62 0.5
406,378 + 15856 mRNA_7488 0.63 -0.4
406,589 + 15856 mRNA_7488 0.68 1.0
407,117 + 15856 mRNA_7488 0.81 0.2
407,162 + 15856 mRNA_7488 0.82 -0.5
407,556 - 0.3
407,566 - 1.2
407,856 - -0.6
407,902 - 0.2
408,016 + -0.2
408,330 + 15857 mRNA_7489 0.19 -1.2
408,409 - 15857 mRNA_7489 0.24 -0.6
408,438 - 15857 mRNA_7489 0.25 0.7
408,462 - 15857 mRNA_7489 0.27 -1.5