Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7310

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7310: 15678 - BLAST cytochrome P450 3A4 [Neurospora crassa OR74A], at 1370309 to 1371999 15678 mRNA_7311: 15679 - K00940 ndk, NME nucleoside-diphosphate kinase, at 1372652 to 1373595 15679

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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1,370,049 - 1.0
1,370,137 + -0.7
1,370,145 - 1.0
1,370,146 + -2.3
1,370,147 - -0.1
1,370,156 + -0.7
1,370,161 + 0.8
1,370,190 - 1.6
1,370,206 + 0.7
1,370,214 + 0.3
1,370,217 - 0.9
1,370,218 + 1.6
1,370,220 - 1.0
1,370,221 + 2.7
1,370,226 - -0.4
1,370,230 - -0.2
1,370,230 - 2.9
1,370,233 + -0.6
1,370,234 - -0.8
1,370,238 + 0.4
1,370,241 + 2.2
1,370,250 + -2.4
1,370,254 + 0.7
1,370,254 + 0.7
1,370,256 + 1.6
1,370,270 + -0.7
1,370,277 + 0.3
1,370,307 + -0.2
1,370,370 - -1.0
1,370,382 + 1.6
1,370,382 + 0.0
1,370,394 - 1.2
1,370,517 - 15678 mRNA_7310 0.12 0.3
1,370,524 + 15678 mRNA_7310 0.13 -0.4
1,370,543 - 15678 mRNA_7310 0.14 1.1
1,370,584 - 15678 mRNA_7310 0.16 0.7
1,370,590 + 15678 mRNA_7310 0.17 1.8
1,370,639 - 15678 mRNA_7310 0.20 -0.7
1,370,666 - 15678 mRNA_7310 0.21 0.1
1,370,698 + 15678 mRNA_7310 0.23 -0.6
1,370,704 + 15678 mRNA_7310 0.23 1.6
1,370,784 - 15678 mRNA_7310 0.28 0.5
1,370,832 - 15678 mRNA_7310 0.31 0.9
1,370,989 - 15678 mRNA_7310 0.40 0.0
1,370,999 - 15678 mRNA_7310 0.41 -0.8
1,371,150 - 15678 mRNA_7310 0.50 1.7
1,371,548 - 15678 mRNA_7310 0.73 -0.1
1,371,588 + 15678 mRNA_7310 0.76 -2.2
1,371,764 + 15678 mRNA_7310 0.86 0.4
1,372,142 + -0.0
1,372,154 + 0.5
1,372,247 - -0.3
1,372,429 - 0.6
1,372,443 + -1.0
1,372,615 + -1.0
1,372,784 - 15679 mRNA_7311 0.14 -3.0