Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7273

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7272: 15640 - Hypothetical Protein, at 1271073 to 1272368 15640 mRNA_7273: 15641 - K15859 SKN7 osomolarity two-component system, response regulator SKN7, at 1272818 to 1275702 15641 mRNA_7274: 15642 - Hypothetical Protein, at 1275952 to 1277293 15642

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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1,271,873 + 15640 mRNA_7272 0.62 1.8
1,271,941 + 15640 mRNA_7272 0.67 1.5
1,271,991 - 15640 mRNA_7272 0.71 -0.7
1,272,001 - 15640 mRNA_7272 0.72 0.6
1,272,125 + 15640 mRNA_7272 0.81 0.6
1,272,152 - 15640 mRNA_7272 0.83 -0.5
1,272,299 + 0.6
1,272,302 - -0.4
1,272,312 + 0.5
1,272,402 + 1.0
1,272,434 - -0.1
1,272,452 - -0.3
1,272,472 - 1.8
1,272,480 + 0.9
1,272,498 + 1.6
1,272,515 - 0.0
1,272,515 - 0.3
1,272,522 + 0.9
1,272,522 + 1.1
1,272,604 + 1.7
1,272,608 - 1.9
1,272,615 - 0.7
1,272,619 + 1.1
1,272,623 + 0.8
1,272,746 - 0.3
1,272,746 - 3.3
1,272,756 - -0.2
1,272,776 + 1.2
1,272,786 - 0.7
1,272,806 - 0.9
1,273,322 - 15641 mRNA_7273 0.17 -1.1
1,273,340 - 15641 mRNA_7273 0.18 1.4
1,273,390 - 15641 mRNA_7273 0.20 3.0
1,273,499 + 15641 mRNA_7273 0.24 1.9
1,273,701 + 15641 mRNA_7273 0.31 0.7
1,274,019 - 15641 mRNA_7273 0.42 1.0
1,274,044 - 15641 mRNA_7273 0.42 0.9
1,274,653 - 15641 mRNA_7273 0.64 0.6
1,274,758 - 15641 mRNA_7273 0.67 1.4
1,274,880 - 15641 mRNA_7273 0.71 0.8
1,274,957 + 15641 mRNA_7273 0.74 -0.0
1,274,957 - 15641 mRNA_7273 0.74 1.8
1,275,494 - -0.1
1,275,531 + -0.9
1,275,553 - -0.8
1,275,700 - 0.0
1,275,796 + -0.3
1,275,817 - 0.3
1,275,829 + 1.0
1,275,954 + 0.9
1,275,978 - 1.0
1,275,979 - 0.9
1,276,002 + 1.0
1,276,009 + 0.1