Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7211

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7211: 15579 - HMMPfam-Fungal specific transcription factor domain-PF11951,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,SUPERFAMILY--SSF57701, at 1140051 to 1142038 15579 mRNA_7212: 15580 - KOG3764 Vesicular amine transporter, at 1142497 to 1144513 15580

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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1,139,420 - 0.3
1,139,526 - -0.5
1,139,540 + 0.9
1,139,542 - -1.2
1,139,545 - 0.7
1,139,594 - 1.2
1,139,693 - 1.5
1,139,708 - -1.2
1,139,708 + 1.0
1,139,708 - 0.1
1,139,751 + 0.1
1,139,826 - 0.3
1,139,873 + 2.9
1,139,978 - 0.4
1,139,988 - 0.0
1,140,009 + 0.2
1,140,011 - 0.7
1,140,018 + -1.9
1,140,114 - -0.7
1,140,279 + 15579 mRNA_7211 0.11 1.1
1,140,292 - 15579 mRNA_7211 0.12 0.5
1,140,294 + 15579 mRNA_7211 0.12 2.4
1,140,304 - 15579 mRNA_7211 0.13 0.8
1,140,578 + 15579 mRNA_7211 0.27 1.1
1,140,736 + 15579 mRNA_7211 0.34 0.2
1,141,039 - 15579 mRNA_7211 0.50 0.4
1,141,058 + 15579 mRNA_7211 0.51 -0.7
1,141,522 + 15579 mRNA_7211 0.74 -0.2
1,141,522 + 15579 mRNA_7211 0.74 0.9
1,142,059 - -0.8
1,142,076 - -0.1
1,142,084 - 1.3
1,142,126 + 0.2
1,142,202 + 0.5
1,142,236 - 0.0
1,142,253 - 0.9
1,142,268 - 0.5
1,142,348 - 0.6
1,142,356 - -1.2
1,142,361 - -0.4
1,142,362 - -0.0
1,142,364 + 0.5
1,142,365 + 0.4
1,142,367 - 0.9
1,142,379 - -0.6
1,142,414 - 0.8
1,142,421 - -1.9
1,142,421 - 0.4
1,142,421 - -0.3
1,142,436 + 0.0
1,142,548 + 2.1
1,142,549 - 0.0
1,142,581 + 0.8
1,142,729 + 15580 mRNA_7212 0.12 -0.1
1,142,731 - 15580 mRNA_7212 0.12 1.2
1,142,736 - 15580 mRNA_7212 0.12 0.5
1,142,842 - 15580 mRNA_7212 0.17 -0.2
1,142,859 + 15580 mRNA_7212 0.18 -0.0