Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7178

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7177: 15545 - KOG0565 Inositol polyphosphate 5-phosphatase and related proteins, at 1057170 to 1058665 15545 mRNA_7178: 15546 - KOG0417 Ubiquitin-protein ligase, at 1058838 to 1059935 15546 mRNA_7179: 15547 - Hypothetical Protein, at 1060340 to 1061881 15547

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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1,058,437 - 15545 mRNA_7177 0.85 0.3
1,058,440 - 15545 mRNA_7177 0.85 -0.9
1,058,459 + 15545 mRNA_7177 0.86 -1.1
1,059,006 + 15546 mRNA_7178 0.15 -0.6
1,059,006 + 15546 mRNA_7178 0.15 -0.5
1,059,008 - 15546 mRNA_7178 0.15 0.2
1,059,597 - 15546 mRNA_7178 0.69 -1.0
1,059,888 + 0.0
1,059,896 - -2.4
1,060,017 - 1.2
1,060,026 + -0.2
1,060,031 + 1.7
1,060,032 + -1.9
1,060,056 + 0.3
1,060,201 + -0.4
1,060,325 + 0.6
1,060,444 - -0.1
1,060,478 - -0.8
1,060,499 + 15547 mRNA_7179 0.10 0.3