Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6867

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6866: 15234 - Hypothetical Protein, at 309366 to 310327 15234 mRNA_6867: 15235 - KOG4121 Nuclear pore complex, Nup133 component (sc Nup133), at 310458 to 312954 15235 mRNA_6868: 15236 - Hypothetical Protein, at 312999 to 313640 15236

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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309,459 - 0.5
309,541 - 15234 mRNA_6866 0.18 -0.7
309,727 + 15234 mRNA_6866 0.38 2.3
309,733 + 15234 mRNA_6866 0.38 0.3
309,762 + 15234 mRNA_6866 0.41 2.9
309,770 - 15234 mRNA_6866 0.42 0.4
309,868 + 15234 mRNA_6866 0.52 2.0
309,916 + 15234 mRNA_6866 0.57 0.1
309,916 - 15234 mRNA_6866 0.57 0.2
310,030 + 15234 mRNA_6866 0.69 2.8
310,151 - 15234 mRNA_6866 0.82 0.8
310,158 + 15234 mRNA_6866 0.82 -0.7
310,637 + 0.7
310,785 - 15235 mRNA_6867 0.13 -1.0
311,660 + 15235 mRNA_6867 0.48 1.3
311,661 + 15235 mRNA_6867 0.48 -0.2
312,213 - 15235 mRNA_6867 0.70 -0.3
312,271 + 15235 mRNA_6867 0.73 2.6
312,459 - 15235 mRNA_6867 0.80 -0.0
312,546 - 15235 mRNA_6867 0.84 0.6
312,571 + 15235 mRNA_6867 0.85 -0.3
312,835 - 2.1
313,092 - 15236 mRNA_6868 0.14 -1.0
313,190 + 15236 mRNA_6868 0.30 -1.2
313,195 - 15236 mRNA_6868 0.31 -0.2
313,441 + 15236 mRNA_6868 0.69 0.2
313,458 - 15236 mRNA_6868 0.71 1.8
313,466 + 15236 mRNA_6868 0.73 0.3
313,563 + 15236 mRNA_6868 0.88 0.6
313,585 + 1.6
313,702 + 0.0
313,705 - -1.0
313,706 - 1.7
313,710 - 0.3
313,710 + -0.1
313,712 + 1.1
313,731 + -0.4
313,741 + 0.8
313,908 + -1.0