Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6723

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6722: 15090 - K17908 WIPI, ATG18 autophagy-related protein 18, at 1539294 to 1541156 15090 mRNA_6723: 15091 - K01078 E3.1.3.2 acid phosphatase, at 1542029 to 1544062 15091 mRNA_6724: 15092 - HMMPfam-Voltage-dependent anion channel-PF03595, at 1544155 to 1546536 15092

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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1,541,215 - 0.3
1,541,255 - -2.9
1,541,510 - -0.5
1,541,644 + 0.6
1,541,806 - 0.0
1,541,815 - 0.7
1,541,820 + 1.0
1,541,930 - -1.3
1,541,935 - -0.2
1,541,938 + -0.3
1,541,947 - 1.5
1,541,948 - -1.4
1,542,005 - 0.5
1,542,084 - 1.3
1,542,097 - -0.6
1,542,193 - 1.3
1,542,257 + 15091 mRNA_6723 0.11 0.8
1,542,280 - 15091 mRNA_6723 0.12 0.2
1,542,353 - 15091 mRNA_6723 0.16 0.6
1,542,389 - 15091 mRNA_6723 0.18 0.7
1,542,543 + 15091 mRNA_6723 0.25 0.0
1,542,792 - 15091 mRNA_6723 0.38 -1.3
1,542,795 + 15091 mRNA_6723 0.38 1.8
1,542,849 - 15091 mRNA_6723 0.40 -0.3
1,542,891 + 15091 mRNA_6723 0.42 -0.3
1,542,999 + 15091 mRNA_6723 0.48 -0.2
1,542,999 + 15091 mRNA_6723 0.48 1.0
1,543,118 - 15091 mRNA_6723 0.54 -0.7
1,543,197 + 15091 mRNA_6723 0.57 0.4
1,543,279 - 15091 mRNA_6723 0.61 0.3
1,543,307 - 15091 mRNA_6723 0.63 -0.1
1,543,366 + 15091 mRNA_6723 0.66 0.5
1,543,368 + 15091 mRNA_6723 0.66 0.8
1,543,540 + 15091 mRNA_6723 0.74 1.7
1,543,549 - 15091 mRNA_6723 0.75 -0.6
1,543,567 - 15091 mRNA_6723 0.76 0.5
1,543,689 - 15091 mRNA_6723 0.82 0.1
1,543,740 - 15091 mRNA_6723 0.84 0.2
1,543,741 - 15091 mRNA_6723 0.84 -0.0
1,543,935 - -0.4
1,544,021 - -0.3
1,544,173 - 0.6
1,544,191 - 0.4
1,544,199 + 3.3
1,544,246 - -0.4
1,544,298 - 0.1
1,544,307 - 0.4
1,544,311 - -0.6
1,544,314 - -0.2
1,544,329 - -0.2
1,544,361 - 2.3
1,544,418 + 15092 mRNA_6724 0.11 -1.1
1,544,421 - 15092 mRNA_6724 0.11 -0.5
1,544,427 + 15092 mRNA_6724 0.11 0.6
1,544,439 - 15092 mRNA_6724 0.12 -2.6
1,544,454 - 15092 mRNA_6724 0.13 0.5
1,544,468 - 15092 mRNA_6724 0.13 1.1
1,544,488 - 15092 mRNA_6724 0.14 0.9
1,544,493 + 15092 mRNA_6724 0.14 -2.0
1,544,498 - 15092 mRNA_6724 0.14 1.3
1,544,584 - 15092 mRNA_6724 0.18 1.1
1,544,685 + 15092 mRNA_6724 0.22 0.9
1,544,689 - 15092 mRNA_6724 0.22 0.0
1,544,696 - 15092 mRNA_6724 0.23 0.6
1,544,836 - 15092 mRNA_6724 0.29 0.9
1,544,852 - 15092 mRNA_6724 0.29 0.2
1,544,889 + 15092 mRNA_6724 0.31 -0.2
1,544,893 - 15092 mRNA_6724 0.31 0.1
1,544,919 + 15092 mRNA_6724 0.32 -0.4
1,544,924 - 15092 mRNA_6724 0.32 0.9
1,544,986 - 15092 mRNA_6724 0.35 -0.6
1,545,057 - 15092 mRNA_6724 0.38 0.5