Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6696

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6695: 15063 - K01045 PON arylesterase / paraoxonase, at 1465595 to 1467254 15063 mRNA_6696: 15064 - KOG3519 Invasion-inducing protein TIAM1/CDC24 and related RhoGEF GTPases, at 1467574 to 1471494 15064 mRNA_6697: 15065 - K07188 LIPE, HSL hormone-sensitive lipase, at 1472035 to 1475787 15065

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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1,466,852 - 15063 mRNA_6695 0.76 0.2
1,466,878 + 15063 mRNA_6695 0.77 0.9
1,466,891 + 15063 mRNA_6695 0.78 0.2
1,466,996 - 15063 mRNA_6695 0.84 0.3
1,466,998 - 15063 mRNA_6695 0.85 -0.1
1,467,019 + 15063 mRNA_6695 0.86 -0.6
1,467,155 + 1.4
1,467,158 - 0.2
1,467,178 + 0.0
1,467,298 + 0.1
1,467,325 - 1.3
1,467,333 - 1.3
1,467,336 - 1.0
1,467,352 + 0.7
1,467,355 + 2.0
1,467,497 + 0.2
1,467,605 + -1.2
1,467,772 + -0.9
1,467,810 + 1.9
1,467,927 + -0.2
1,468,243 + 15064 mRNA_6696 0.17 -0.4
1,468,251 + 15064 mRNA_6696 0.17 1.0
1,468,368 + 15064 mRNA_6696 0.20 1.6
1,468,369 - 15064 mRNA_6696 0.20 1.9
1,468,394 + 15064 mRNA_6696 0.21 -1.3
1,468,616 + 15064 mRNA_6696 0.27 -2.8
1,468,669 - 15064 mRNA_6696 0.28 -1.6
1,468,814 + 15064 mRNA_6696 0.32 1.5
1,468,948 - 15064 mRNA_6696 0.35 -1.4
1,468,968 - 15064 mRNA_6696 0.36 -1.0
1,469,101 - 15064 mRNA_6696 0.39 -0.3
1,469,296 - 15064 mRNA_6696 0.44 0.6
1,469,374 - 15064 mRNA_6696 0.46 -0.3
1,469,401 - 15064 mRNA_6696 0.47 0.0
1,469,682 + 15064 mRNA_6696 0.54 1.1
1,469,850 - 15064 mRNA_6696 0.58 -0.1
1,469,852 + 15064 mRNA_6696 0.58 -0.2
1,469,876 - 15064 mRNA_6696 0.59 0.3
1,470,014 - 15064 mRNA_6696 0.62 0.1
1,470,266 + 15064 mRNA_6696 0.69 0.1
1,470,475 - 15064 mRNA_6696 0.74 -1.2
1,470,699 + 15064 mRNA_6696 0.80 0.1
1,470,837 - 15064 mRNA_6696 0.83 0.1
1,470,847 + 15064 mRNA_6696 0.83 -0.4
1,470,851 - 15064 mRNA_6696 0.84 -0.2
1,470,953 + 15064 mRNA_6696 0.86 0.3
1,470,995 - 15064 mRNA_6696 0.87 -0.4
1,471,106 + 2.6
1,471,122 - 0.3
1,471,233 + 0.3
1,471,282 - 1.2
1,471,296 + -2.0
1,471,426 + 2.6
1,471,435 - 0.1
1,471,563 + -1.6
1,471,565 - -0.4
1,471,624 - -0.2
1,471,713 - 0.7
1,471,722 - 0.2
1,471,727 + -0.5
1,471,727 - -0.1
1,471,728 - 0.3
1,471,739 + 0.5
1,471,742 - -0.2
1,471,744 - -0.3
1,471,752 - -0.4
1,471,892 - 0.1
1,471,911 - 0.4
1,471,920 + 2.1